RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 FNIP1Q8TF40 1166 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 GAD1Q99259 594 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 PRKAG3Q9UGI9 489 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 PDHXO00330 501 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 KATNA1O75449 491 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 LRG1P02750 347 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 BPGMP07738 259 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 ATP5F1P24539 256 aaPredicted RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 HPCAP84074 193 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 PTPN20Q4JDL3 420 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 KHDC1Q4VXA5 237 aaKnown RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 WSCD1Q658N2 575 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 PLPPR4Q7Z2D5 763 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 LGMNQ99538 433 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 DCUN1D5Q9BTE7 237 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 MECRQ9BV79 373 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 SEMA6AQ9H2E6 1030 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 TMEM245Q9H330 911 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 ATP13A1Q9HD20 1204 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 TMCC3Q9ULS5 477 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 FZD1Q9UP38 647 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 SPTLC1O15269 473 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 HOXA2O43364 376 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 ZMPSTE24O75844 475 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 GUCA1CO95843 209 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 OAS1P00973 400 aaKnown RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 ALDH2P05091 517 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 ZNF7P17097 686 aaPredicted RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 GOT1P17174 413 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 NFKB1P19838 968 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 CRHR1P34998 444 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 RETSATQ6NUM9 610 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 SLC44A2Q8IWA5 706 aaPredicted RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 B3GALNT2Q8NCR0 500 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 PAIP1Q9H074 479 aaKnown RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 GIMAP4Q9NUV9 329 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 YWHAQP27348 245 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 CNTN1Q12860 1018 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 MTA1Q13330 715 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 PIWIL4Q7Z3Z4 852 aaKnown RBP13.99□□□□□ -0.17
SYNPO-205ENST00000522122 CCDC103Q8IW40 242 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 PCSK9Q8NBP7 692 aaKnown RBP13.99□□□□□ -0.17
SYNPO-205ENST00000522122 EMILIN2Q9BXX0 1053 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 ADAM7Q9H2U9 754 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 SELENONQ9NZV5 590 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 NKX1-2Q9UD57 310 aaPredicted RBP13.99□□□□□ -0.17
SYNPO-205ENST00000522122 HES2Q9Y543 173 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 GNG14A0A1W2PPG7 69 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 ERBB2P04626 1255 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 LTA4HP09960 611 aaKnown RBP13.99□□□□□ -0.17
SYNPO-205ENST00000522122 TKTP29401 623 aaKnown RBP13.99□□□□□ -0.17
SYNPO-205ENST00000522122 EPHX2P34913 555 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 RAP1GDS1P52306 607 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 TMEM132BQ14DG7 1078 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 PAWRQ96IZ0 340 aaKnown RBP13.99□□□□□ -0.17
SYNPO-205ENST00000522122 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 KANSL3Q9P2N6 904 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 LIMD1Q9UGP4 676 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 ZNF839A8K0R7 811 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 BTN3A1O00481 513 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 DDNO94850 711 aaPredicted RBP13.99□□□□□ -0.17
SYNPO-205ENST00000522122 DLGAP3O95886 979 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 LBPP18428 481 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 GRIA4P48058 902 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 PDK3Q15120 406 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 NRF1Q16656 503 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 IQSEC1Q6DN90 963 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 TLK2Q86UE8 772 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 NIPA2Q8N8Q9 360 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 GORASP1Q9BQQ3 440 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 MRPS26Q9BYN8 205 aaKnown RBP13.99□□□□□ -0.17
SYNPO-205ENST00000522122 ABCC13Q9NSE7 274 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 CLCA2Q9UQC9 943 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 RAP2CQ9Y3L5 183 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 RREB1Q92766 1687 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 CCDC166P0CW27 439 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 RRM2P31350 389 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 CDC16Q13042 620 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 C16orf72Q14CZ0 275 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 ZNF284Q2VY69 593 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 SLC51AQ86UW1 340 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 XYLT1Q86Y38 959 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 C12orf29Q8N999 325 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 MAGED4Q96JG8 741 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 UGT2B28Q9BY64 529 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 S100A14Q9HCY8 104 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 MAN1C1Q9NR34 630 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 NUDT5Q9UKK9 219 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 PACSIN3Q9UKS6 424 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 ITGB4P16144 1822 aa13.99□□□□□ -0.17
SYNPO-205ENST00000522122 ATRNL1Q5VV63 1379 aa13.98□□□□□ -0.17
SYNPO-205ENST00000522122 SMIM31A0A1B0GVY4 71 aa13.98□□□□□ -0.17
SYNPO-205ENST00000522122 FGF10O15520 208 aaPredicted RBP13.98□□□□□ -0.17
SYNPO-205ENST00000522122 CNOT3O75175 753 aaKnown RBP13.98□□□□□ -0.17
SYNPO-205ENST00000522122 MLNP12872 115 aa13.98□□□□□ -0.17
SYNPO-205ENST00000522122 ERCC2P18074 760 aa13.98□□□□□ -0.17
SYNPO-205ENST00000522122 POU1F1P28069 291 aa13.98□□□□□ -0.17
SYNPO-205ENST00000522122 PSEN2P49810 448 aa13.98□□□□□ -0.17
SYNPO-205ENST00000522122 NEDD8Q15843 81 aa13.98□□□□□ -0.17
SYNPO-205ENST00000522122 SPRED3Q2MJR0 410 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms