RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF814B7Z6K7 855 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 PEX12O00623 359 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 HOXC11O43248 304 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 GUCY1B2O75343 617 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 FCGR2AP12318 317 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 PRF1P14222 555 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 PRKCHP24723 683 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 PTGER1P34995 402 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 HNF1BP35680 557 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 PSMC2P35998 433 aaKnown RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 GPD2P43304 727 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 MTNR1AP48039 350 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 ALDH7A1P49419 539 aaKnown RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZNF81P51508 661 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 CCR5P51681 352 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 DDX10Q13206 875 aaKnown RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 RABEP1Q15276 862 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 INPP5JQ15735 1006 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 ETFDHQ16134 617 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 ALFQ53S48 1182 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZNF425Q6IV72 752 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 GJB7Q6PEY0 223 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 LRRC8DQ7L1W4 858 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 PIP4P1Q86T03 277 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 CCDC25Q86WR0 208 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 SLC25A41Q8N5S1 370 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 TMEM217Q8N7C4 229 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 Q8N9P0 234 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 SCAIQ8N9R8 606 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 NOC3LQ8WTT2 800 aaKnown RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 STAMQ92783 540 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 RNFT2Q96EX2 444 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 FRMD8Q9BZ67 464 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 CTDSP1Q9GZU7 261 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 HIPK3Q9H422 1215 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 ACAD9Q9H845 621 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 TTC12Q9H892 705 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZNF304Q9HCX3 659 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 SEMA4BQ9NPR2 832 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 DECR2Q9NUI1 292 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 HEY2Q9UBP5 337 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 UPB1Q9UBR1 384 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 PCDHA12Q9UN75 941 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 PCF11O94913 1555 aaKnown RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 MST1RQ04912 1400 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 CENPJQ9HC77 1338 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 TRBV5-7A0A0A0MS05 114 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 A0A0G2JK05 382 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 LY6G6EA0A0G2JKS1 128 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 CCDC189A1A4V9 331 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 OR6C68A6NDL8 312 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 SH2D7A6NKC9 451 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 SOCS2O14508 198 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 RNMTO43148 476 aaKnown RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 ATG13O75143 517 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZC3H11AO75152 810 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 TULP3O75386 442 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 DDAH2O95865 285 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 IFNA2P01563 188 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 KLKB1P03952 638 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 IFIT1P09914 478 aaKnown RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 CYP19A1P11511 503 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 XBP1P17861 261 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 TBXAS1P24557 533 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 KLRC2P26717 231 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 LAMB3Q13751 1172 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 IL13RA2Q14627 380 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 MANEAQ5SRI9 462 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 TTLL5Q6EMB2 1281 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 RETSATQ6NUM9 610 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 B4GALNT4Q76KP1 1039 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZDHHC23Q8IYP9 409 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 MMP21Q8N119 569 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 DPP10Q8N608 796 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 FAR1Q8WVX9 515 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 EME1Q96AY2 570 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 MSI2Q96DH6 328 aaKnown RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 HMCESQ96FZ2 354 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 GPR63Q9BZJ6 419 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 SPRTNQ9H040 489 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 AAMDCQ9H7C9 122 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 FZD3Q9NPG1 666 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 PNRC2Q9NPJ4 139 aaKnown RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 WASH6PQ9NQA3 447 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 TLR8Q9NR97 1041 aaKnown RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZDHHC7Q9NXF8 308 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 ALKBH4Q9NXW9 302 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 ELOVL5Q9NYP7 299 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 GRHL1Q9NZI5 618 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 CNOT7Q9UIV1 285 aaKnown RBP3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 PRDM4Q9UKN5 801 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 CLDN16Q9Y5I7 305 aa3.55□□□□□ -1.84
HMGB1P41-201ENST00000520234 UGGT2Q9NYU1 1516 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 SMG6Q86US8 1419 aaKnown RBP3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 TONSLQ96HA7 1378 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 GOLGA6L10A0A0M3HER8 536 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 A0A1B0GVC2 190 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 C17orf102A2RUQ5 167 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 FAM90A7PA6NKC0 464 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 C17orf100A8MU93 164 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms