RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 PLXNA4Q9HCM2 1894 aa27.4■■□□□ 1.98
COL13A1-212ENST00000520133 ZCWPW2A0A1B0GU75 182 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 C2orf78A6NCI8 922 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 PMPCBO75439 489 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 TAC1P20366 129 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 PCID2Q5JVF3 399 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 CCDC197Q8NCU1 140 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 IMP4Q96G21 291 aaKnown RBP27.39■■□□□ 1.98
COL13A1-212ENST00000520133 KLHL5Q96PQ7 755 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 CPNE1Q99829 537 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 KIFC1Q9BW19 673 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 CHRAC1Q9NRG0 131 aa27.39■■□□□ 1.98
COL13A1-212ENST00000520133 MKI67P46013 3256 aaKnown RBP27.39■■□□□ 1.98
COL13A1-212ENST00000520133 CLDN11O75508 207 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 RFPL1O75677 317 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 ERVK-10P10266 1014 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 FOXN2P32314 431 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 NEK3P51956 506 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 FPGSQ05932 587 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 ADGRF1Q5T601 910 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 POTEHQ6S545 545 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 LRRC8CQ8TDW0 803 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 MFSD3Q96ES6 412 aa27.39■■□□□ 1.97
COL13A1-212ENST00000520133 ELAC2Q9BQ52 826 aaKnown RBP27.39■■□□□ 1.97
COL13A1-212ENST00000520133 OBSL1O75147 1896 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 PRAMEF11O60813 436 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 KLKB1P03952 638 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 CNPP09543 421 aaKnown RBP27.38■■□□□ 1.97
COL13A1-212ENST00000520133 MBL2P11226 248 aaPredicted RBP27.38■■□□□ 1.97
COL13A1-212ENST00000520133 ACVRL1P37023 503 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 GP5P40197 560 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 CCNFP41002 786 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 TMCO4Q5TGY1 634 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 HERC6Q8IVU3 1022 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 PTCD2Q8WV60 388 aaKnown RBP27.38■■□□□ 1.97
COL13A1-212ENST00000520133 CLP1Q92989 425 aaKnown RBP27.38■■□□□ 1.97
COL13A1-212ENST00000520133 MRGPRX2Q96LB1 330 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 HAUS2Q9NVX0 235 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 MKS1Q9NXB0 559 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 PCDH10Q9P2E7 1040 aa27.38■■□□□ 1.97
COL13A1-212ENST00000520133 F11P03951 625 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 IRF1P10914 325 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 ALADP13716 330 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 ADRA1DP25100 572 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 LBRQ14739 615 aaKnown RBP27.37■■□□□ 1.97
COL13A1-212ENST00000520133 GRTP1Q5TC63 336 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 DENND5AQ6IQ26 1287 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 RANBP10Q6VN20 620 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 PPHLN1Q8NEY8 458 aaKnown RBP27.37■■□□□ 1.97
COL13A1-212ENST00000520133 ZNF599Q96NL3 588 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 VPS11Q9H270 941 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 SLC17A7Q9P2U7 560 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 GRID1Q9ULK0 1009 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 HMX2A2RU54 273 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 WNT3AP56704 352 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 C1QTNF8P60827 252 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 GNA12Q03113 381 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 ARMC3Q5W041 872 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 CHST9Q7L1S5 443 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 TMEM150AQ86TG1 271 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 KLHL23Q8NBE8 558 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 GRAMD1AQ96CP6 724 aa27.37■■□□□ 1.97
COL13A1-212ENST00000520133 SRPK1Q96SB4 655 aaKnown RBP27.37■■□□□ 1.97
COL13A1-212ENST00000520133 AGO1Q9UL18 857 aaKnown RBP27.37■■□□□ 1.97
COL13A1-212ENST00000520133 ATXN2Q99700 1313 aaKnown RBP27.36■■□□□ 1.97
COL13A1-212ENST00000520133 TGM5O43548 720 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 LATS1O95835 1130 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 LINC00271P0C7V0 271 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 SPATA31D3P0C874 917 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 ZKSCAN8Q15776 578 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-212ENST00000520133 PKN3Q6P5Z2 889 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 KDELC1Q6UW63 502 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 SPATA31D4Q6ZUB0 917 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 TMC7Q7Z402 723 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 KCNMB4Q86W47 210 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 ACMSDQ8TDX5 336 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 BADQ92934 168 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 PITPNM3Q9BZ71 974 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 MRM3Q9HC36 420 aaKnown RBP27.36■■□□□ 1.97
COL13A1-212ENST00000520133 TRPC7Q9HCX4 862 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 ZNF334Q9HCZ1 680 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-212ENST00000520133 C20orf96Q9NUD7 363 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-212ENST00000520133 IL1RAPL1Q9NZN1 696 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 SLC17A6Q9P2U8 582 aa27.36■■□□□ 1.97
COL13A1-212ENST00000520133 DENND4CQ5VZ89 1909 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 SNX3O60493 162 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 KIAA0754O94854 1291 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 CXCL14O95715 111 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 LRG1P02750 347 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 ADH1AP07327 375 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 MAXP61244 160 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 RPS24P62847 133 aaKnown RBP27.35■■□□□ 1.97
COL13A1-212ENST00000520133 ITIH4Q14624 930 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 PDPK2PQ6A1A2 396 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 CCDC149Q6ZUS6 474 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 BBS5Q8N3I7 341 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 PRICKLE1Q96MT3 831 aaPredicted RBP27.35■■□□□ 1.97
COL13A1-212ENST00000520133 PSAT1Q9Y617 370 aa27.35■■□□□ 1.97
COL13A1-212ENST00000520133 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-212ENST00000520133 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms