RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ZNF341Q9BYN7 854 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 SH3BP4Q9P0V3 963 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZNF70Q9UC06 446 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 ICKQ9UPZ9 632 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 TMEM5Q9Y2B1 443 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 SNX8Q9Y5X2 465 aa5.66□□□□□ -1.5
HMGB1P46-201ENST00000520062 TCRBV7S3A2A0A539 114 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 MGST3O14880 152 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 STARD3NLO95772 234 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 DDAH2O95865 285 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 CD72P21854 359 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 CHRNA5P30532 468 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 ACTN2P35609 894 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 PTPN9P43378 593 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 GABRB2P47870 512 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 CYP2J2P51589 502 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 YWHAZP63104 245 aaKnown RBP5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 PRAMEP78395 509 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 IRX6P78412 446 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 AIMP2Q13155 320 aaKnown RBP5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 CRYMQ14894 314 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 EDRF1Q3B7T1 1238 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 FBXO43Q4G163 708 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 AWAT1Q58HT5 328 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 FAM133BQ5BKY9 247 aaKnown RBP5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 PLEKHS1Q5SXH7 462 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 MFSD4BQ5TF39 518 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 SERTAD4-AS1Q5TG53 156 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 TMEM268Q5VZI3 342 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 PDXDC1Q6P996 788 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 TMEM154Q6P9G4 183 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 TMTC2Q8N394 836 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 AMER2Q8N7J2 671 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 FRMD1Q8N878 549 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 TMEM116Q8NCL8 245 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 TMEM170AQ8WVE7 144 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 PIGKQ92643 395 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 SARAFQ96BY9 339 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 RITA1Q96K30 269 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 CENPOQ9BU64 300 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 FRMD8Q9BZ67 464 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 BABAM1Q9NWV8 329 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 ADAM21Q9UKJ8 722 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 PACSIN3Q9UKS6 424 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 FBXO4Q9UKT5 387 aa5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 CORO1CQ9ULV4 474 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P46-201ENST00000520062 MSI1O43347 362 aaKnown RBP5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 KIF1CO43896 1103 aaKnown RBP5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 PAGE4O60829 102 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 RNF8O76064 485 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 CBX6O95503 412 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 PLAUP00749 431 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 LCKP06239 509 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 HEXAP06865 529 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 IRF1P10914 325 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 AKR1B1P15121 316 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 TFEBP19484 476 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 GPD1P21695 349 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 POU1F1P28069 291 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 PPARGP37231 505 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 HADHAP40939 763 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 MTA1Q13330 715 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 TAF11Q15544 211 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 DPCR1Q3MIW9 517 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 KIAA1755Q5JYT7 1200 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 Q6ZPA2 131 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 SRBD1Q8N5C6 995 aaKnown RBP5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 WDTC1Q8N5D0 677 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 BCAS4Q8TDM0 211 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 FAR1Q8WVX9 515 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 NEU4Q8WWR8 484 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 IP6K1Q92551 441 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 H2AFJQ9BTM1 129 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 DUSP26Q9BV47 211 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 ZNF747Q9BV97 191 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 TM2D2Q9BX73 214 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 CPNE5Q9HCH3 593 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 SNTG1Q9NSN8 517 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 NLKQ9UBE8 527 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 SERGEFQ9UGK8 458 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 ZNF215Q9UL58 517 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 A4GNTQ9UNA3 340 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 SLC8A2Q9UPR5 921 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 WNT6Q9Y6F9 365 aa5.64□□□□□ -1.51
HMGB1P46-201ENST00000520062 A0A1W2PRG0 241 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 LRRC53A6NM62 1247 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 MYO1GB0I1T2 1018 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 NPIPB8E9PQR5 432 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 INPPL1O15357 1258 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 IL1AP01583 271 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 TUBB4AP04350 444 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 HOXB5P09067 269 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 ST6GAL1P15907 406 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 HOXA7P31268 230 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 TTKP33981 857 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 KRT20P35900 424 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 PBX3P40426 434 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 EFNA5P52803 228 aa5.63□□□□□ -1.51
HMGB1P46-201ENST00000520062 SLC12A2P55011 1212 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms