RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 FASTKD5Q7L8L6 764 aaKnown RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 KCTD20Q7Z5Y7 419 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 ZNF329Q86UD4 541 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 SKAP1Q86WV1 359 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 DGKHQ86XP1 1220 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 CCAR1Q8IX12 1150 aaKnown RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 GRAMD1CQ8IYS0 662 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 ANKRD13AQ8IZ07 590 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 MIGA1Q8NAN2 632 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 CTCFLQ8NI51 663 aaPredicted RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 CCDC12Q8WUD4 166 aaPredicted RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 CHURC1Q8WUH1 139 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 TMEM255BQ8WV15 326 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 STAG1Q8WVM7 1258 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 LPAR1Q92633 364 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 PIGKQ92643 395 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 SPSB4Q96A44 273 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 VPS50Q96JG6 964 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 NEK1Q96PY6 1258 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 GATA5Q9BWX5 397 aaPredicted RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 MAF1Q9H063 256 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 RBM38Q9H0Z9 239 aaKnown RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 DEFB129Q9H1M3 183 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 TAF1DQ9H5J8 278 aaPredicted RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 TDRD3Q9H7E2 651 aaKnown RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 PIH1D3Q9NQM4 214 aaKnown RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 TCP11L1Q9NUJ3 509 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 ARL8BQ9NVJ2 186 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 RBM28Q9NW13 759 aaKnown RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 TMOD4Q9NZQ9 345 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 WNT16Q9UBV4 365 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 SEC63Q9UGP8 760 aaKnown RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 ANAPC4Q9UJX5 808 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 AGO2Q9UKV8 859 aaKnown RBP2.09□□□□□ -2.07
CCNC-208ENST00000519617 RIMKLBQ9ULI2 386 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 ATP6V1DQ9Y5K8 247 aa2.09□□□□□ -2.07
CCNC-208ENST00000519617 SCN4AP35499 1836 aa2.09□□□□□ -2.08
CCNC-208ENST00000519617 FLT1P17948 1338 aa2.09□□□□□ -2.08
CCNC-208ENST00000519617 BRCA1P38398 1863 aaKnown RBP2.09□□□□□ -2.08
CCNC-208ENST00000519617 FER1L6Q2WGJ9 1857 aa2.09□□□□□ -2.08
CCNC-208ENST00000519617 DICER1Q9UPY3 1922 aaKnown RBP2.09□□□□□ -2.08
CCNC-208ENST00000519617 MAST2Q6P0Q8 1798 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 CACNA1SQ13698 1873 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 A0A0D9SFI3 127 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 A0A1W2PPL8 197 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 CLRN2A0PK11 232 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 MBD3L4A6NDZ8 208 aaPredicted RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 MBD3L3A6NE82 208 aaPredicted RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 YDJCA8MPS7 323 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 SNAP23O00161 211 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 TNFRSF13BO14836 293 aaPredicted RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 IFIT3O14879 490 aaKnown RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 PHGDHO43175 533 aaKnown RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 ZBTB43O43298 467 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 CA12O43570 354 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 RRP9O43818 475 aaKnown RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 MBPP02686 304 aaPredicted RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 TOP1P11387 765 aaKnown RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 CETPP11597 493 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 TFEBP19484 476 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 CASTP20810 708 aaKnown RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 PTMSP20962 102 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 KLRK1P26718 216 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 EPS15P42566 896 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 LIFRP42702 1097 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 PGDP52209 483 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 CCNA1P78396 465 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 HMGN5P82970 282 aaKnown RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 AMPD3Q01432 767 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 TFAP4Q01664 338 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 ICA1Q05084 483 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 CCDC15Q0P6D6 951 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 TCP10Q12799 353 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 IKQ13123 557 aaPredicted RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 DNASE1L3Q13609 305 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 SAFBQ15424 915 aaKnown RBP eCLIP2.08□□□□□ -2.08
CCNC-208ENST00000519617 ASPRV1Q53RT3 343 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 C12orf60Q5U649 245 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 CACHD1Q5VU97 1274 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 NUGGCQ68CJ6 796 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 NADSYN1Q6IA69 706 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 GALNT17Q6IS24 598 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 APOBEC3HQ6NTF7 200 aaKnown RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 CTR9Q6PD62 1173 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 OLFM4Q6UX06 510 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 USP49Q70CQ1 688 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 RUFY3Q7L099 469 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 TRAPPC11Q7Z392 1133 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 FAM160B2Q86V87 743 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 ERO1BQ86YB8 467 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 DENND1CQ8IV53 801 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 SCYL3Q8IZE3 742 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 FBXL16Q8N461 479 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 CERS5Q8N5B7 392 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 SAMD3Q8N6K7 520 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 ZNF713Q8N859 430 aaPredicted RBP2.08□□□□□ -2.08
CCNC-208ENST00000519617 FAM184AQ8NB25 1140 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 OR56A3Q8NH54 315 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 BICD2Q8TD16 824 aa2.08□□□□□ -2.08
CCNC-208ENST00000519617 ELP5Q8TE02 316 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms