RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 USP29Q9HBJ7 922 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 DNPEPQ9ULA0 475 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 ZNF148Q9UQR1 794 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 R3HDM2Q9Y2K5 976 aaKnown RBP9.65□□□□□ -0.86
CLN8-203ENST00000518780 MRFAP1Q9Y605 127 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 EYSQ5T1H1 3165 aa9.65□□□□□ -0.87
CLN8-203ENST00000518780 F5P12259 2224 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 COL6A3P12111 3177 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 EDDM13A0A1B0GTR0 161 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 ALOX15BO15296 676 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 OPHN1O60890 802 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 GCATO75600 419 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 TMCC1O94876 653 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 CD160O95971 181 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 GAS8O95995 478 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 GSRP00390 522 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 C7P10643 843 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 SRCP12931 536 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 RBL1P28749 1068 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 ACTN2P35609 894 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 COILP38432 576 aaPredicted RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 MMP13P45452 471 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 RECQLP46063 649 aaPredicted RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 CLCN5P51795 746 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 SNRPD1P62314 119 aaKnown RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 RAD51Q06609 339 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 MESP2Q0VG99 397 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 ZNF234Q14588 700 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 ZNF235Q14590 738 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 STARD3Q14849 445 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 UBXN2BQ14CS0 331 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 DLG2Q15700 870 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 SLC14A2Q15849 920 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 P3H1Q32P28 736 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 HNRNPA1L2Q32P51 320 aaKnown RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 FNDC3BQ53EP0 1204 aaKnown RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 IER5LQ5T953 404 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 NAIF1Q69YI7 327 aaPredicted RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 ALG1LQ6GMV1 187 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 ITPRIPL1Q6GPH6 555 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 SERPINA13PQ6UXR4 307 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 BMP8AQ7Z5Y6 402 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 ADAT2Q7Z6V5 191 aaKnown RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 DSG4Q86SJ6 1040 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 TP53INP2Q8IXH6 220 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 CHPFQ8IZ52 775 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 SPATA4Q8NEY3 305 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 PJA1Q8NG27 643 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 FRS2Q8WU20 508 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 C1orf54Q8WWF1 131 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 EZH1Q92800 747 aaPredicted RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 TEKT5Q96M29 485 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 GABRG3Q99928 467 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 CINPQ9BW66 212 aaPredicted RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 AP1M1Q9BXS5 423 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 POLR1EQ9GZS1 481 aaKnown RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 MFSD1Q9H3U5 465 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 L2HGDHQ9H9P8 463 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 LMAN1LQ9HAT1 526 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 RBM22Q9NW64 420 aaKnown RBP eCLIP9.64□□□□□ -0.87
CLN8-203ENST00000518780 PCYOX1Q9UHG3 505 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 SLCO3A1Q9UIG8 710 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 NDRG2Q9UN36 371 aaKnown RBP9.64□□□□□ -0.87
CLN8-203ENST00000518780 SIT1Q9Y3P8 196 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 STON1Q9Y6Q2 735 aa9.64□□□□□ -0.87
CLN8-203ENST00000518780 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 A0A1W2PQ67 120 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 CTAGE15A4D2H0 777 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 WASH3PC4AMC7 463 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 KCNK1O00180 336 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 STK25O00506 426 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 KCNN4O15554 427 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 SYNCRIPO60506 623 aaKnown RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 MAP3K6O95382 1288 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 POP4O95707 220 aaKnown RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 IGSF6O95976 241 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 MT-CO1P00395 513 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 JCHAINP01591 159 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 CTAGE8P0CG41 777 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 CHRM1P11229 460 aaPredicted RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 CD72P21854 359 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 GLDCP23378 1020 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 TARSP26639 723 aaKnown RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 CTSOP43234 321 aaPredicted RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 RHOAP61586 193 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 AP1S1P61966 158 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 SLC10A7Q0GE19 358 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 WASHC5Q12768 1159 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 SFSWAPQ12872 951 aaKnown RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 FZD5Q13467 585 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 DHX34Q14147 1143 aaKnown RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 ELAVL3Q14576 367 aaKnown RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 CYTH1Q15438 398 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 ACCSLQ4AC99 568 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 CARD16Q5EG05 197 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 EGFLAMQ63HQ2 1017 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 C22orf39Q6P5X5 142 aa9.63□□□□□ -0.87
CLN8-203ENST00000518780 CCDC137Q6PK04 289 aaKnown RBP9.63□□□□□ -0.87
CLN8-203ENST00000518780 LINGO4Q6UY18 593 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms