RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 UGT1A7Q9HAW7 530 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT1A10Q9HAW8 530 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT1A8Q9HAW9 530 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ANKHQ9HCJ1 492 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 C20orf96Q9NUD7 363 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 PAQR5Q9NXK6 330 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 EHD3Q9NZN3 535 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 APEX2Q9UBZ4 518 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 LGALS13Q9UHV8 139 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 TSPYL4Q9UJ04 414 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 FBXO2Q9UK22 296 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 CPSF3Q9UKF6 684 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNRF3Q9ULT6 936 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 EIF3LQ9Y262 564 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 YBX2Q9Y2T7 364 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 TESMINQ9Y4I5 508 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 CPQQ9Y646 472 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SF3B1O75533 1304 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 MN1Q10571 1320 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 PCDH11YQ9BZA8 1340 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 DIP2AQ14689 1571 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 INO80Q9ULG1 1556 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ADAMTS20P59510 1910 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TROQ12816 1431 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 IFT172Q9UG01 1749 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARAP3Q8WWN8 1544 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 A0A0U1RQJ8 604 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 C17orf113A0A1B0GUU1 675 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 A0A1W2PRG6 482 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ESYT3A0FGR9 886 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRR23AA6NEV1 266 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 MEIS3P2A8K0S8 358 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSMD11O00231 422 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSMD9O00233 223 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PLK4O00444 970 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TOR1AO14656 332 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSMA7O14818 248 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 POLR2DO15514 142 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRPF4O43172 522 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 DAPK3O43293 454 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SSX5O60225 188 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SURF6O75683 361 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 BCL10O95999 233 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 IL1BP01584 269 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 A1BGP04217 495 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 UBTFL1P0CB47 393 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 GZMAP12544 262 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 NPR1P16066 1061 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ITGB6P18564 788 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ATF4P18848 351 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 HOXA5P20719 270 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ECHS1P30084 290 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SHMT1P34896 483 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 GRIA2P42262 883 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 MTHFRP42898 656 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ABCG1P45844 678 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 STT3AP46977 705 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 STARP49675 285 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ADCY7P51828 1080 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARHGDIBP52566 201 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC12A2P55011 1212 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TPTEP56180 551 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TBX4P57082 545 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 RPL10AP62906 217 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 RHAGQ02094 409 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TEKQ02763 1124 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CALCOCO2Q13137 446 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SELENBP1Q13228 472 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC29A2Q14542 456 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CDK10Q15131 360 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRIP13Q15645 432 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PFKFB3Q16875 520 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TXNRD1Q16881 649 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 GEN1Q17RS7 908 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TYSND1Q2T9J0 566 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TBRG1Q3YBR2 411 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 FUT11Q495W5 492 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CERKLQ49MI3 558 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CEP55Q53EZ4 464 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 EFHC1Q5JVL4 640 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 METTL24Q5JXM2 366 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 KIAA1755Q5JYT7 1200 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 OGFRL1Q5TC84 451 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 GARNL3Q5VVW2 1013 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 FAM205BPQ63HN1 556 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF544Q6NX49 715 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 MACC1Q6ZN28 852 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARHGAP36Q6ZRI8 547 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 FAM47EQ6ZV65 393 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 RAPH1Q70E73 1250 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF605Q86T29 641 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARMC8Q8IUR7 673 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 UNC5CLQ8IV45 518 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CTAGE3PQ8IX95 158 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 KBTBD2Q8IY47 623 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TMEM192Q8IY95 271 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CHPFQ8IZ52 775 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 RASGEF1CQ8N431 466 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 GALNT4Q8N4A0 578 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 OXR1Q8N573 874 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms