RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 WNT8BQ93098 351 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 FBXO44Q9H4M3 255 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 ATXN10Q9UBB4 475 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 CDH22Q9UJ99 828 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 LAMB2P55268 1798 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 NHSQ6T4R5 1651 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 A8MX80 341 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 MYL4P12829 197 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 ARF4P18085 180 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 PGAM1P18669 254 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 GCAP28676 217 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 NR2C2P49116 596 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 CMPK2Q5EBM0 449 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 GRAMD4Q6IC98 578 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 MIER2Q8N344 545 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 HOXA2O43364 376 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 SIN3BO75182 1162 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 RBP1P09455 135 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 CCDC153Q494R4 210 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 XYLT1Q86Y38 959 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 CCDC126Q96EE4 140 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 VPS50Q96JG6 964 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 SFMBT1Q9UHJ3 866 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 CRYL1Q9Y2S2 319 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 HNRNPRO43390 633 aaKnown RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 TRIM13O60858 407 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 BAIAP3O94812 1187 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 GUCA1CO95843 209 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 SMIM10L2AP0DMW4 78 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 SMIM10L2BP0DMW5 78 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 EPB42P16452 691 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 PSMB4P28070 264 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 AXLP30530 894 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 NOS2P35228 1153 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZC3H12BQ5HYM0 836 aaKnown RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 VWA5B1Q5TIE3 1220 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 UGT3A1Q6NUS8 523 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 SATL1Q86VE3 508 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 TREML1Q86YW5 311 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 IGDCC3Q8IVU1 814 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 SLC44A2Q8IWA5 706 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 VPS37AQ8NEZ2 397 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 OR52K1Q8NGK4 314 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZFAND2BQ8WV99 257 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 ELOVL4Q9GZR5 314 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 STN1Q9H668 368 aaKnown RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 KANSL3Q9P2N6 904 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF180Q9UJW8 692 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 CXorf49A8MYA2 514 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 CLDN5O00501 218 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 LZTS3O60299 673 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 XIAPP98170 497 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 USP4Q13107 963 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 ADRM1Q16186 407 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 AASDHQ4L235 1098 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 ARHGAP15Q53QZ3 475 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 BHLHE22Q8NFJ8 381 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 PRDM12Q9H4Q4 367 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 ENTPD7Q9NQZ7 604 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 MRGBPQ9NV56 204 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 PLA2G4CQ9UP65 541 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 TRPV2Q9Y5S1 764 aa10.99□□□□□ -0.65
PCDHGA1-202ENST00000517417 MAGEB16A2A368 324 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 NR5A2O00482 541 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 FARP2O94887 1054 aaPredicted RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 CSH1P0DML2 217 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 CSH2P0DML3 217 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ITGALP20701 1170 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 PBLDP30039 288 aaPredicted RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 SOAT1P35610 550 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 SLC18A2Q05940 514 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ELAVL2Q12926 359 aaKnown RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 CCDC85BQ15834 202 aaPredicted RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 EML3Q32P44 896 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 AARS2Q5JTZ9 985 aaKnown RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ABHD15Q6UXT9 468 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 LGI2Q8N0V4 545 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 FBXW8Q8N3Y1 598 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF555Q8NEP9 628 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 LGMNQ99538 433 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 TEX12Q9BXU0 123 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ADGRE3Q9BY15 652 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 B3GNT5Q9BYG0 378 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF541Q9H0D2 1346 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 H2AFYO75367 372 aaKnown RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 EGFRP00533 1210 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 NPR3P17342 541 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 EPHB3P54753 998 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 TMEM63BQ5T3F8 832 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZFP1Q6P2D0 407 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 TRMT10BQ6PF06 316 aaKnown RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 PLPPR4Q7Z2D5 763 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 EFL1Q7Z2Z2 1120 aaKnown RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 TNS4Q8IZW8 715 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 B3GALNT2Q8NCR0 500 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZSCAN18Q8TBC5 510 aaPredicted RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 NRG4Q8WWG1 115 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 LENG1Q96BZ8 264 aaPredicted RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 SERPINB11Q96P15 392 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms