RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 PWWP2BQ6NUJ5 590 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 ARMCX5Q6P1M9 558 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 OLFM4Q6UX06 510 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 LRRC31Q6UY01 552 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 ZNF852Q6ZMS4 543 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 PPP1R32Q7Z5V6 425 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 RASSF3Q86WH2 238 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 NEXN-AS1Q8NBZ9 246 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 CEP76Q8TAP6 659 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 ZFPM2Q8WW38 1151 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 TMEM190Q8WZ59 177 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 CPT1BQ92523 772 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 SLC5A5Q92911 643 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 ZNF669Q96BR6 464 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 ST6GAL2Q96JF0 529 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 ZNF333Q96JL9 665 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 CSF3RQ99062 836 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 LMF2Q9BU23 707 aaKnown RBP-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 SLC39A8Q9C0K1 460 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 MKKSQ9NPJ1 570 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 RNF146Q9NTX7 359 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 PLCXD1Q9NUJ7 323 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 SPTLC3Q9NUV7 552 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 ATAD3AQ9NVI7 634 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 MTPAPQ9NVV4 582 aaKnown RBP eCLIP-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 DNAJC28Q9NX36 388 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 SIDT1Q9NXL6 827 aaKnown RBP-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 NUDT4Q9NZJ9 180 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 IL17BQ9UHF5 180 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 FEZ2Q9UHY8 353 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 KLK12Q9UKR0 248 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 PCDHB2Q9Y5E7 798 aa-0.04□□□□□ -2.42
SNORA40.17-201ENST00000517256 ASTN2O75129 1339 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 CGNL1Q0VF96 1302 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 STK36Q9NRP7 1315 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 NOTCH1P46531 2555 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 EPM2AB3EWF7 344 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 PER2O15055 1255 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 PDPK1O15530 556 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 F2P00734 622 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 HPP00738 406 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 WNT1P04628 370 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 LCKP06239 509 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 IGHV4-30-4P0DP06 118 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 TMEM225BP0DP42 221 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 PAX1P15863 534 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 ATF4P18848 351 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 ELK1P19419 428 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 MALP21145 153 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 NFKBIAP25963 317 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 KLRC2P26717 231 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 NDUFS1P28331 727 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 RFC1P35251 1148 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 SOX3P41225 446 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 BCAT1P54687 386 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 TIRAPP58753 221 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 SRSF2Q01130 221 aaKnown RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 KIF23Q02241 960 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 TLE1Q04724 770 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 SPOCK1Q08629 439 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 KCNA1Q09470 495 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 CTTNQ14247 550 aaKnown RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 KIF22Q14807 665 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 NECTIN1Q15223 517 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 E2F5Q15329 346 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 PUM3Q15397 648 aaKnown RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 KHDC1Q4VXA5 237 aaKnown RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 EIPR1Q53HC9 387 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 CCDC157Q569K6 752 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 SIRPB2Q5JXA9 342 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 C10orf76Q5T2E6 689 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 KLHL24Q6TFL4 600 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 CLEC9AQ6UXN8 241 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 TRPT1Q86TN4 253 aaKnown RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 MPP5Q8N3R9 675 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 SUMF1Q8NBK3 374 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 ZNF540Q8NDQ6 660 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 KLHDC9Q8NEP7 349 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 TYMSOSQ8TAI1 123 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 LNX1Q8TBB1 728 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 STT3BQ8TCJ2 826 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 BICD2Q8TD16 824 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 STAG1Q8WVM7 1258 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 RAPGEF4Q8WZA2 1011 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 APPBP2Q92624 585 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 TANKQ92844 425 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 BADQ92934 168 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 DHX58Q96C10 678 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 GMPPAQ96IJ6 420 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 MAGED4Q96JG8 741 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 NEUROD6Q96NK8 337 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 LRRC1Q9BTT6 524 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 DDX23Q9BUQ8 820 aaKnown RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 BACH2Q9BYV9 841 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 RAD21L1Q9H4I0 556 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 PATZ1Q9HBE1 687 aaKnown RBP-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 TRIM39Q9HCM9 518 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 CALCOCO1Q9P1Z2 691 aa-0.05□□□□□ -2.42
SNORA40.17-201ENST00000517256 XPR1Q9UBH6 696 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms