RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 C3orf49Q96BT1 292 aa3.04□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SGCZQ96LD1 299 aa3.04□□□□□ -1.92
RNU6-1088P-201ENST00000516850 EPYCQ99645 322 aa3.04□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SLC25A33Q9BSK2 321 aa3.04□□□□□ -1.92
RNU6-1088P-201ENST00000516850 TMLHEQ9NVH6 421 aa3.04□□□□□ -1.92
RNU6-1088P-201ENST00000516850 OCIAD1Q9NX40 245 aa3.04□□□□□ -1.92
RNU6-1088P-201ENST00000516850 C19orf53Q9UNZ5 99 aaPredicted RBP3.04□□□□□ -1.92
RNU6-1088P-201ENST00000516850 LINC01553A4QN01 128 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CYSRT1A8MQ03 144 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ERVV-2B6SEH9 535 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 STRNO43815 780 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SOCS5O75159 536 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SKAP2O75563 359 aaPredicted RBP3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KRT36O76013 467 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ACTL6BO94805 426 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 TNFRSF6BO95407 300 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 PPP1R3DO95685 299 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 TFRCP02786 760 aaKnown RBP3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SNRNP70P08621 437 aaKnown RBP3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CYP4B1P13584 511 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SERPINA4P29622 427 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 PPM1AP35813 382 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 RPS6KA3P51812 740 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 AP2B1P63010 937 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 ZNF284Q2VY69 593 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SYTL3Q4VX76 610 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 HSP90AB2PQ58FF8 381 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 RNF144BQ7Z419 303 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 EXOC3L1Q86VI1 746 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 WDR5BQ86VZ2 330 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 TMC8Q8IU68 726 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 GALNT15Q8N3T1 639 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 HDAC7Q8WUI4 952 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 EID2BQ96D98 161 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 TXNDC15Q96J42 360 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 TEFMQ96QE5 360 aaKnown RBP3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KATNAL1Q9BW62 490 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 SEPSECSQ9HD40 501 aaKnown RBP3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 OBP2BQ9NPH6 170 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 NLRC4Q9NPP4 1024 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 TCF7L2Q9NQB0 619 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CHST12Q9NRB3 414 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 NDUFAF4Q9P032 175 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 KCNG2Q9UJ96 466 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 CDC23Q9UJX2 597 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 LRCH1Q9Y2L9 728 aa3.03□□□□□ -1.92
RNU6-1088P-201ENST00000516850 A0A096LPK6 155 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 A0A0B4J293 547 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 IGHV4-28A0A0C4DH34 117 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 NPIPB13A6NJU9 1138 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 NPIPB5A8MRT5 1133 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 KDM4EB2RXH2 506 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 NPIPB4C9JG80 1138 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 BUB3O43684 328 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 HEXIM1O94992 359 aaKnown RBP3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SOX30O94993 753 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 CKMT1AP12532 417 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ZNF12P17014 697 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ITGB8P26012 769 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 THPOP40225 353 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 GPR12P47775 334 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 FAM76BQ5HYJ3 339 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DGAT2L7PQ6IED9 249 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TYW3Q6IPR3 259 aaKnown RBP3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DSTYKQ6XUX3 929 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SYNE3Q6ZMZ3 975 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 GALNT7Q86SF2 657 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SLC44A2Q8IWA5 706 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SCN4BQ8IWT1 228 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PTGR2Q8N8N7 351 aaPredicted RBP3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 FSIP1Q8NA03 581 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TEX45Q8NA69 505 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SLC2A12Q8TD20 617 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 HES6Q96HZ4 224 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ADGRG7Q96K78 797 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 LHPPQ9H008 270 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 CLPBQ9H078 707 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DDX31Q9H8H2 851 aaKnown RBP3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 FNIP2Q9P278 1114 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 KLQ9UEF7 1012 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DAPP1Q9UN19 280 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 OSGIN2Q9Y236 505 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PAM16Q9Y3D7 125 aa3.02□□□□□ -1.93
RNU6-1088P-201ENST00000516850 IGLV5-52A0A0A0MRZ9 124 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 A0A1B0GVM2 712 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DDTLA6NHG4 134 aaPredicted RBP3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SRRM3A6NNA2 597 aaPredicted RBP3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 LGALS16A8MUM7 142 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SEPT4O43236 478 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DDNO94850 711 aaPredicted RBP3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 CBX6O95503 412 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DDAH2O95865 285 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 F7P08709 466 aaPredicted RBP3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 YWHAQP27348 245 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DPP6P42658 865 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 POU5F1BQ06416 359 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TRAF3Q13114 568 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SF3B4Q15427 424 aaKnown RBP eCLIP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms