RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 RBM38Q9H0Z9 239 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BCL11AQ9H165 835 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLKQ9H2G2 1235 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PABPC3Q9H361 631 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PCNX3Q9H6A9 2034 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DDX31Q9H8H2 851 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TCF7L2Q9NQB0 619 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ABCB10Q9NRK6 738 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLSCR3Q9NRY6 295 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 THAP1Q9NVV9 213 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TAB2Q9NYJ8 693 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LRFN1Q9P244 771 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PAK5Q9P286 719 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MYO1AQ9UBC5 1043 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CACNG5Q9UF02 275 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CNOT8Q9UFF9 292 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SRP68Q9UHB9 627 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ASIC3Q9UHC3 531 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AGO2Q9UKV8 859 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ACSL5Q9ULC5 683 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MYO6Q9UM54 1294 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SHOC2Q9UQ13 582 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PKP3Q9Y446 797 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RAI2Q9Y5P3 530 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MYH15Q9Y2K3 1946 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RUSC2Q8N2Y8 1516 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ARHGEF40Q8TER5 1519 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CHD4Q14839 1912 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 hCG_2014768A0A024R1R8 64 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 A0A087WV62 115 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBC1D3DA0A087WVF3 549 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBC1D3IA0A087WXS9 549 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBC1D3EA0A087X179 549 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBC1D3KA0A087X1G2 549 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SAA2-SAA4A0A096LPE2 208 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 A0A0G2JPF8 293 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLSCR5A0PG75 271 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CCDC151A5D8V7 595 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBC1D3BA6NDS4 549 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBC1D3FA6NER0 549 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HMX3A6NHT5 357 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MYMKA6NI61 221 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HSPB2A8KAH6 182 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LACTBL1A8MY62 500 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BTBD18B2RXH4 712 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HNRNPCL2B2RXH8 293 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HNRNPCL3B7ZW38 293 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBC1D3LB9A6J9 549 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KLRF2D3W0D1 207 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 E7EVH7 732 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 H0Y3Z8 333 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 H3BQ06 376 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GCOM1H8Y6P7 765 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PSMD9O00233 223 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BMPR1BO00238 502 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CLGNO14967 610 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LDLRAD4O15165 306 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NKX2-8O15522 239 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MAFGO15525 162 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MSI1O43347 362 aaKnown RBP0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPRY3O43610 288 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BUB3O43684 328 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PI15O43692 258 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ITM2AO43736 263 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CIDEAO60543 219 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SNX2O60749 519 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HNRNPCL1O60812 293 aaKnown RBP0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NBNO60934 754 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 COQ9O75208 318 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TULP3O75386 442 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LRCH4O75427 683 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RFPL1O75677 317 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC22A3O75751 556 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FGF18O76093 207 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NXPH3O95157 252 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GCNT3O95395 438 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PMS2P2O95744 297 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CLDN1O95832 211 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DDAH2O95865 285 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SYF2O95926 243 aaKnown RBP0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ONECUT2O95948 504 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZBED1O96006 694 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 IFNA2P01563 188 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ANXA1P04083 346 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 THP07101 528 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 WEE2P0C1S8 567 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBC1D3HP0C7X1 549 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HNRNPCL4P0DMR1 293 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CBSLP0DN79 551 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ENO3P13929 434 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AKR1A1P14550 325 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PKMP14618 531 aaKnown RBP0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ARSBP15848 533 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CPEP16870 476 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EGR1P18146 543 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 VCAM1P19320 739 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 UBA1P22314 1058 aaKnown RBP0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TACR3P29371 465 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ALDH1B1P30837 517 aa0.33□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CHRNA3P32297 505 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms