RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 FTSJ1Q9UET6 329 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 IL36AQ9UHA7 158 aa17.87■□□□□ 0.45
DDX41-217ENST00000515562 PRAMEF26H0Y7S4 382 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 CCDC172P0C7W6 258 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 GLDCP23378 1020 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 MAT2AP31153 395 aaKnown RBP17.86■□□□□ 0.45
DDX41-217ENST00000515562 MAPKAPK2P49137 400 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 PHLDB2Q86SQ0 1253 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 PCDH20Q8N6Y1 951 aaKnown RBP17.86■□□□□ 0.45
DDX41-217ENST00000515562 JOSD2Q8TAC2 188 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 GRIN3AQ8TCU5 1115 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 FAM172AQ8WUF8 416 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 CENPIQ92674 756 aaPredicted RBP17.86■□□□□ 0.45
DDX41-217ENST00000515562 PCDHB18PQ96TA0 734 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 SELENOOQ9BVL4 669 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 NAT10Q9H0A0 1025 aaKnown RBP17.86■□□□□ 0.45
DDX41-217ENST00000515562 TNKS2Q9H2K2 1166 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 SEPT11Q9NVA2 429 aaKnown RBP17.86■□□□□ 0.45
DDX41-217ENST00000515562 AKAP13Q12802 2813 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 SPEGQ15772 3267 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 ZFHX4Q86UP3 3567 aa17.86■□□□□ 0.45
DDX41-217ENST00000515562 ANKRD62A6NC57 917 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 RNGTTO60942 597 aaKnown RBP17.85■□□□□ 0.45
DDX41-217ENST00000515562 ZMPSTE24O75844 475 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 ITGAVP06756 1048 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 RHOQP17081 205 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 EPHA8P29322 1005 aaPredicted RBP17.85■□□□□ 0.45
DDX41-217ENST00000515562 HDAC4P56524 1084 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 GEMIN4P57678 1058 aaKnown RBP17.85■□□□□ 0.45
DDX41-217ENST00000515562 TAS2R38P59533 333 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 ARF5P84085 180 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
DDX41-217ENST00000515562 STAT4Q14765 748 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 NCAPHQ15003 741 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 RWDD4Q6NW29 188 aaKnown RBP17.85■□□□□ 0.45
DDX41-217ENST00000515562 CCNI2Q6ZMN8 369 aaPredicted RBP17.85■□□□□ 0.45
DDX41-217ENST00000515562 DPY19L3Q6ZPD9 716 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 ERN2Q76MJ5 926 aaKnown RBP17.85■□□□□ 0.45
DDX41-217ENST00000515562 MON1BQ7L1V2 547 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 WDFY3Q8IZQ1 3526 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 CHST14Q8NCH0 376 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 SAP25Q8TEE9 199 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 NTAN1Q96AB6 310 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 TBC1D31Q96DN5 1066 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 HDAC8Q9BY41 377 aa17.85■□□□□ 0.45
DDX41-217ENST00000515562 GOLGA8CPA6NN73 597 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 GJB6O95452 261 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 GPD1P21695 349 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 RFC1P35251 1148 aaPredicted RBP17.84■□□□□ 0.45
DDX41-217ENST00000515562 RXRGP48443 463 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 TYRO3Q06418 890 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 SCAPQ12770 1279 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 SHBQ15464 509 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 RAB6CQ53S08 254 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 PRAMEF14Q5SWL7 426 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 DNAJC24Q6P3W2 148 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 TMPRSS7Q7RTY8 843 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 APTXQ7Z2E3 356 aaKnown RBP17.84■□□□□ 0.45
DDX41-217ENST00000515562 NLRP14Q86W24 1093 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 HORMAD1Q86X24 394 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 GATAD2AQ86YP4 633 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 GALNT15Q8N3T1 639 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 AOPEPQ8N6M6 819 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 ARRDC3Q96B67 414 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 AGPAT1Q99943 283 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 RAB6CQ9H0N0 254 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 HSD3B7Q9H2F3 369 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 TMEM248Q9NWD8 314 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 NEU3Q9UQ49 428 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 PTPRBP23467 1997 aa17.84■□□□□ 0.45
DDX41-217ENST00000515562 CHD5Q8TDI0 1954 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 A0A1W2PQU0 124 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 SIGLEC16A6NMB1 481 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 ZNF821O75541 412 aaPredicted RBP17.83■□□□□ 0.44
DDX41-217ENST00000515562 LEFTY1O75610 366 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 LRIG2O94898 1065 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 PLEKP08567 350 aaPredicted RBP17.83■□□□□ 0.44
DDX41-217ENST00000515562 FERP16591 822 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 DESP17661 470 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 ITGB7P26010 798 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 CCNHP51946 323 aaPredicted RBP17.83■□□□□ 0.44
DDX41-217ENST00000515562 NEK3P51956 506 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 ARSIQ5FYB1 569 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 CCDC185Q8N715 623 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 TMEM145Q8NBT3 493 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 ISG20Q96AZ6 181 aaKnown RBP17.83■□□□□ 0.44
DDX41-217ENST00000515562 HEPHQ9BQS7 1158 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 MAGEH1Q9H213 219 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 HPCAL4Q9UM19 191 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 WASF2Q9Y6W5 498 aa17.83■□□□□ 0.44
DDX41-217ENST00000515562 SRRM3A6NNA2 597 aaPredicted RBP17.82■□□□□ 0.44
DDX41-217ENST00000515562 RAMP2O60895 175 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 HNRNPA2B1P22626 353 aaKnown RBP17.82■□□□□ 0.44
DDX41-217ENST00000515562 ACVRL1P37023 503 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 ZNF143P52747 638 aaPredicted RBP17.82■□□□□ 0.44
DDX41-217ENST00000515562 AIF1P55008 147 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 CARD16Q5EG05 197 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 EFHC2Q5JST6 749 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 PPP1R2P3Q6NXS1 205 aa17.82■□□□□ 0.44
DDX41-217ENST00000515562 WDR59Q6PJI9 974 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms