RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ACP6Q9NPH0 428 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 HOOK1Q9UJC3 728 aaKnown RBP16.12■□□□□ 0.17
LMNA-223ENST00000515459 SATB2Q9UPW6 733 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 COL27A1Q8IZC6 1860 aaPredicted RBP16.12■□□□□ 0.17
LMNA-223ENST00000515459 B8ZZF3 427 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 H3BM21 787 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 K7ERQ8 282 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 SNAP91O60641 907 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 GRAP2O75791 330 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 RHOCP08134 193 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 C6P13671 934 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 CD44P16070 742 aaKnown RBP16.11■□□□□ 0.17
LMNA-223ENST00000515459 TGM2P21980 687 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 RRM1P23921 792 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 RBMS1P29558 406 aaKnown RBP16.11■□□□□ 0.17
LMNA-223ENST00000515459 CLCN6P51797 869 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 TMEM259Q4ZIN3 620 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 ISM2Q6H9L7 571 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 OR6B2Q6IFH4 312 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 TTI2Q6NXR4 508 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 C14orf80Q86SX3 495 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 TRIM59Q8IWR1 403 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 CHST14Q8NCH0 376 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 ZNF548Q8NEK5 533 aaPredicted RBP16.11■□□□□ 0.17
LMNA-223ENST00000515459 GRIN3AQ8TCU5 1115 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 PPP1R13BQ96KQ4 1090 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 BMFQ96LC9 184 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 CPXM1Q96SM3 734 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 PSMB7Q99436 277 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 SLC17A9Q9BYT1 436 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 GPR27Q9NS67 375 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 NCKIPSDQ9NZQ3 722 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 IL36AQ9UHA7 158 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 VPS51Q9UID3 782 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 SSUH2Q9Y2M2 353 aa16.11■□□□□ 0.17
LMNA-223ENST00000515459 SPTY2D1-AS1A0A0U1RR47 76 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 GOLGA6L4A6NEF3 574 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 RNF103O00237 685 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
LMNA-223ENST00000515459 SMAD6O43541 496 aaKnown RBP16.1■□□□□ 0.17
LMNA-223ENST00000515459 CNTN5O94779 1100 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 GNA14O95837 355 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 AFPP02771 609 aaKnown RBP16.1■□□□□ 0.17
LMNA-223ENST00000515459 CSF2P04141 144 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 NME1P15531 152 aaKnown RBP16.1■□□□□ 0.17
LMNA-223ENST00000515459 RECQLP46063 649 aaPredicted RBP16.1■□□□□ 0.17
LMNA-223ENST00000515459 RPS21P63220 83 aaKnown RBP16.1■□□□□ 0.17
LMNA-223ENST00000515459 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
LMNA-223ENST00000515459 FZD2Q14332 565 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 CDKN3Q16667 212 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 ARSIQ5FYB1 569 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 KLHL10Q6JEL2 608 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 KIAA1161Q6NSJ0 714 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 FOXR2Q6PJQ5 311 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 KYAT3Q6YP21 454 aaKnown RBP16.1■□□□□ 0.17
LMNA-223ENST00000515459 ENOSF1Q7L5Y1 443 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 PARGQ86W56 976 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 WDTC1Q8N5D0 677 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 DCAF4L2Q8NA75 395 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 TPCN2Q8NHX9 752 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 CCDC97Q96F63 343 aaPredicted RBP16.1■□□□□ 0.17
LMNA-223ENST00000515459 SLC46A1Q96NT5 459 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.1■□□□□ 0.17
LMNA-223ENST00000515459 CSNK1G3Q9Y6M4 447 aa16.1■□□□□ 0.17
LMNA-223ENST00000515459 BICDL2A1A5D9 508 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 CPED1A4D0V7 1026 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 POM121BA6NF01 834 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 M0QYT0 321 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 LEFTY1O75610 366 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 PAK4O96013 591 aaPredicted RBP16.09■□□□□ 0.17
LMNA-223ENST00000515459 NOS2P35228 1153 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 RABIFP47224 123 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 NEK3P51956 506 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 ALFQ53S48 1182 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 C22orf39Q6P5X5 142 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 LINGO4Q6UY18 593 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 C11orf57Q6ZUT1 292 aaPredicted RBP16.09■□□□□ 0.17
LMNA-223ENST00000515459 FAM183BPQ6ZVS7 135 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 EFL1Q7Z2Z2 1120 aaKnown RBP16.09■□□□□ 0.17
LMNA-223ENST00000515459 SETD3Q86TU7 594 aaPredicted RBP16.09■□□□□ 0.17
LMNA-223ENST00000515459 NELFBQ8WX92 580 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 MED8Q96G25 268 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 ATXN7L3BQ96GX2 97 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 FEM1CQ96JP0 617 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 TNKS2Q9H2K2 1166 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 WDCPQ9H6R7 721 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 IPO11Q9UI26 975 aaKnown RBP16.09■□□□□ 0.17
LMNA-223ENST00000515459 PCDHGA8Q9Y5G5 932 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 ENTPD2Q9Y5L3 495 aa16.09■□□□□ 0.17
LMNA-223ENST00000515459 A0A0D9SEW6 157 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 K7ENP7 123 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 AQP9O43315 295 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 DAB1O75553 588 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 ADRB3P13945 408 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 USP8P40818 1118 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 MARSP56192 900 aaKnown RBP16.08■□□□□ 0.16
LMNA-223ENST00000515459 SNX16P57768 344 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 SKOR1P84550 965 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 FGL2Q14314 439 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 GUSBP11Q6P575 273 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms