RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 RNF103O00237 685 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 FOXN3O00409 490 aaPredicted RBP15.36■□□□□ 0.05
DDR1-278ENST00000515233 ZNF821O75541 412 aaPredicted RBP15.36■□□□□ 0.05
DDR1-278ENST00000515233 GP1BAP07359 652 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 ALPPL2P10696 532 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 TFE3P19532 575 aaPredicted RBP15.36■□□□□ 0.05
DDR1-278ENST00000515233 RRM1P23921 792 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 OR1E1P30953 314 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 SCNN1AP37088 669 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 GABRB2P47870 512 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 TLE3Q04726 772 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 DEUP1Q05D60 604 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 SLC20A2Q08357 652 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 BECN1Q14457 450 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 TMEM259Q4ZIN3 620 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 ARSIQ5FYB1 569 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 ARTNQ5T4W7 220 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 LRRC31Q6UY01 552 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 ZNF783Q6ZMS7 281 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 GCNT7Q6ZNI0 430 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 DPY19L3Q6ZPD9 716 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 GPR155Q7Z3F1 870 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 SLC47A2Q86VL8 602 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 SLC22A18ASQ8N1D0 253 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 FAM181AQ8N9Y4 354 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 CHST14Q8NCH0 376 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 PPP1R16AQ96I34 528 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 MYOCQ99972 504 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 CALN1Q9BXU9 219 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 SYNCQ9H7C4 482 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 USP29Q9HBJ7 922 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 SIX2Q9NPC8 291 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 GPR27Q9NS67 375 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 KIAA1468Q9P260 1216 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 DNAJC12Q9UKB3 198 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 DOCK4Q8N1I0 1966 aa15.36■□□□□ 0.05
DDR1-278ENST00000515233 ILVBLA1L0T0 632 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 SCAMP1O15126 338 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 OPA1O60313 960 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 LEFTY1O75610 366 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 C1QL1O75973 258 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 PCDH8O95206 1070 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 CDH5P33151 784 aaPredicted RBP15.35■□□□□ 0.05
DDR1-278ENST00000515233 CLDN2P57739 230 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 BPIFB4P59827 614 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 RNASE9P60153 205 aaKnown RBP15.35■□□□□ 0.05
DDR1-278ENST00000515233 HNRNPKP61978 463 aaKnown RBP eCLIP15.35■□□□□ 0.05
DDR1-278ENST00000515233 SLC25A52Q3SY17 297 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 C22orf39Q6P5X5 142 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 LINGO4Q6UY18 593 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 Q6ZSR6 202 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 FAM71AQ8IYT1 594 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 LSMEM2Q8N112 164 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 TMEM35BQ8NCS4 154 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 FEM1CQ96JP0 617 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 BMFQ96LC9 184 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 APOLD1Q96LR9 279 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 ZNF578Q96N58 590 aaPredicted RBP15.35■□□□□ 0.05
DDR1-278ENST00000515233 HAPLN3Q96S86 360 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 DUSP23Q9BVJ7 150 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 SLC17A9Q9BYT1 436 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 CEP44Q9C0F1 390 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 FZD3Q9NPG1 666 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 MPP6Q9NZW5 540 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 ZNF212Q9UDV6 495 aa15.35■□□□□ 0.05
DDR1-278ENST00000515233 AJAP1Q9UKB5 411 aaPredicted RBP15.35■□□□□ 0.05
DDR1-278ENST00000515233 TRPM6Q9BX84 2022 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 LY6G6EA0A0G2JKS1 128 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 CXorf51AA0A1B0GTR3 108 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 A6NNZ2 444 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 FFAR2O15552 330 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 GADD45BO75293 160 aaPredicted RBP15.34■□□□□ 0.05
DDR1-278ENST00000515233 ZMPSTE24O75844 475 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 DXOO77932 396 aaKnown RBP15.34■□□□□ 0.05
DDR1-278ENST00000515233 CSF2P04141 144 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 PRB1P04280 392 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 RECQLP46063 649 aaPredicted RBP15.34■□□□□ 0.05
DDR1-278ENST00000515233 SULT1E1P49888 294 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 DUSP3P51452 185 aaPredicted RBP15.34■□□□□ 0.05
DDR1-278ENST00000515233 NEK3P51956 506 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 RPS21P63220 83 aaKnown RBP15.34■□□□□ 0.05
DDR1-278ENST00000515233 SEL1L3Q68CR1 1132 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 KIAA1161Q6NSJ0 714 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 RETSATQ6NUM9 610 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 TMC6Q7Z403 805 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 BNIPLQ7Z465 357 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 ZSCAN30Q86W11 494 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 SPACA3Q8IXA5 215 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 PCDH20Q8N6Y1 951 aaKnown RBP15.34■□□□□ 0.05
DDR1-278ENST00000515233 ZNF248Q8NDW4 579 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 C18orf8Q96DM3 657 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 DEPDC7Q96QD5 511 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 TBCBQ99426 244 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 TNKS2Q9H2K2 1166 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 PLCB1Q9NQ66 1216 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 PCDHB1Q9Y5F3 818 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 SNX10Q9Y5X0 201 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 WASF2Q9Y6W5 498 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 U3KQA8 63 aa15.34■□□□□ 0.05
DDR1-278ENST00000515233 PTPRQQ9UMZ3 2332 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms