RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 FAM167BQ9BTA0 163 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 RBM22Q9NW64 420 aaKnown RBP eCLIP15.09■□□□□ 0.01
NUP54-217ENST00000514987 UBP1Q9NZI7 540 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 GABRQQ9UN88 632 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 CASP8AP2Q9UKL3 1982 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 NUP205Q92621 2012 aa15.09■□□□□ 0.01
NUP54-217ENST00000514987 FAM155AB1AL88 458 aaPredicted RBP15.08■□□□□ 0
NUP54-217ENST00000514987 E9PAM4 449 aa15.08■□□□□ 0
NUP54-217ENST00000514987 SLCO1B7G3V0H7 640 aa15.08■□□□□ 0
NUP54-217ENST00000514987 PSMG1O95456 288 aa15.08■□□□□ 0
NUP54-217ENST00000514987 IBSPP21815 317 aaPredicted RBP15.08■□□□□ 0
NUP54-217ENST00000514987 ADRA1AP35348 466 aa15.08■□□□□ 0
NUP54-217ENST00000514987 MAGEA11P43364 429 aa15.08■□□□□ 0
NUP54-217ENST00000514987 RENBPP51606 427 aa15.08■□□□□ 0
NUP54-217ENST00000514987 CLNS1AP54105 237 aaKnown RBP15.08■□□□□ 0
NUP54-217ENST00000514987 MXRA7P84157 204 aa15.08■□□□□ 0
NUP54-217ENST00000514987 KDSRQ06136 332 aa15.08■□□□□ 0
NUP54-217ENST00000514987 DSC1Q08554 894 aa15.08■□□□□ 0
NUP54-217ENST00000514987 MTA1Q13330 715 aa15.08■□□□□ 0
NUP54-217ENST00000514987 ITGA7Q13683 1181 aa15.08■□□□□ 0
NUP54-217ENST00000514987 USP10Q14694 798 aaKnown RBP15.08■□□□□ 0
NUP54-217ENST00000514987 GRM3Q14832 879 aa15.08■□□□□ 0
NUP54-217ENST00000514987 SLC39A12Q504Y0 691 aa15.08■□□□□ 0
NUP54-217ENST00000514987 KIAA0408Q6ZU52 694 aa15.08■□□□□ 0
NUP54-217ENST00000514987 SLC24A5Q71RS6 500 aa15.08■□□□□ 0
NUP54-217ENST00000514987 PLD6Q8N2A8 252 aaKnown RBP15.08■□□□□ 0
NUP54-217ENST00000514987 IPMKQ8NFU5 416 aa15.08■□□□□ 0
NUP54-217ENST00000514987 FICDQ9BVA6 458 aa15.08■□□□□ 0
NUP54-217ENST00000514987 FSD1LQ9BXM9 530 aa15.08■□□□□ 0
NUP54-217ENST00000514987 ILKAPQ9H0C8 392 aaPredicted RBP15.08■□□□□ 0
NUP54-217ENST00000514987 CDH19Q9H159 772 aa15.08■□□□□ 0
NUP54-217ENST00000514987 PNPOQ9NVS9 261 aa15.08■□□□□ 0
NUP54-217ENST00000514987 OXSMQ9NWU1 459 aa15.08■□□□□ 0
NUP54-217ENST00000514987 STX18Q9P2W9 335 aaKnown RBP15.08■□□□□ 0
NUP54-217ENST00000514987 DNAJB4Q9UDY4 337 aa15.08■□□□□ 0
NUP54-217ENST00000514987 SLC39A10Q9ULF5 831 aa15.08■□□□□ 0
NUP54-217ENST00000514987 PLA2G4CQ9UP65 541 aa15.08■□□□□ 0
NUP54-217ENST00000514987 TCAF1Q9Y4C2 921 aa15.08■□□□□ 0
NUP54-217ENST00000514987 A0A1W2PQH9 124 aa15.07■□□□□ 0
NUP54-217ENST00000514987 DDHD2O94830 711 aa15.07■□□□□ 0
NUP54-217ENST00000514987 COL6A1P12109 1028 aa15.07■□□□□ 0
NUP54-217ENST00000514987 RHOQP17081 205 aa15.07■□□□□ 0
NUP54-217ENST00000514987 VHLP40337 213 aa15.07■□□□□ 0
NUP54-217ENST00000514987 PTDSS1P48651 473 aaKnown RBP15.07■□□□□ 0
NUP54-217ENST00000514987 FAM189BP81408 668 aa15.07■□□□□ 0
NUP54-217ENST00000514987 SLC34A1Q06495 639 aa15.07■□□□□ 0
NUP54-217ENST00000514987 THOC5Q13769 683 aaKnown RBP15.07■□□□□ 0
NUP54-217ENST00000514987 HNRNPDQ14103 355 aaKnown RBP15.07■□□□□ 0
NUP54-217ENST00000514987 ACSBG2Q5FVE4 666 aa15.07■□□□□ 0
NUP54-217ENST00000514987 NOMO2Q5JPE7 1267 aa15.07■□□□□ 0
NUP54-217ENST00000514987 KIAA0930Q6ICG6 404 aaPredicted RBP15.07■□□□□ 0
NUP54-217ENST00000514987 DENND5AQ6IQ26 1287 aa15.07■□□□□ 0
NUP54-217ENST00000514987 FAM43BQ6ZT52 329 aaPredicted RBP15.07■□□□□ 0
NUP54-217ENST00000514987 RNF180Q86T96 592 aa15.07■□□□□ 0
NUP54-217ENST00000514987 SCN4BQ8IWT1 228 aa15.07■□□□□ 0
NUP54-217ENST00000514987 UMODL1-AS1Q8N2C9 162 aa15.07■□□□□ 0
NUP54-217ENST00000514987 CALML6Q8TD86 181 aa15.07■□□□□ 0
NUP54-217ENST00000514987 AZIN2Q96A70 460 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ATXN7L3BQ96GX2 97 aa15.07■□□□□ 0
NUP54-217ENST00000514987 NAF1Q96HR8 494 aaKnown RBP15.07■□□□□ 0
NUP54-217ENST00000514987 FAM161BQ96MY7 647 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ZNF570Q96NI8 536 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ACE2Q9BYF1 805 aaPredicted RBP15.07■□□□□ 0
NUP54-217ENST00000514987 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.07■□□□□ 0
NUP54-217ENST00000514987 SLC25A51Q9H1U9 297 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ARNT2Q9HBZ2 717 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ZNF212Q9UDV6 495 aa15.07■□□□□ 0
NUP54-217ENST00000514987 VTI1BQ9UEU0 232 aa15.07■□□□□ 0
NUP54-217ENST00000514987 SFMBT1Q9UHJ3 866 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ANGPTL2Q9UKU9 493 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ACOT9Q9Y305 439 aa15.07■□□□□ 0
NUP54-217ENST00000514987 PLXNA3P51805 1871 aa15.07■□□□□ 0
NUP54-217ENST00000514987 A0A087X1B8 175 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ZNF195O14628 629 aa15.07■□□□□ 0
NUP54-217ENST00000514987 LIN7AO14910 233 aaPredicted RBP15.07■□□□□ 0
NUP54-217ENST00000514987 SYN3O14994 580 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ITGB1P05556 798 aa15.07■□□□□ 0
NUP54-217ENST00000514987 COPAP53621 1224 aa15.07■□□□□ 0
NUP54-217ENST00000514987 RCN1Q15293 331 aa15.07■□□□□ 0
NUP54-217ENST00000514987 LIPMQ5VYY2 423 aa15.07■□□□□ 0
NUP54-217ENST00000514987 EPGNQ6UW88 154 aa15.07■□□□□ 0
NUP54-217ENST00000514987 RANBP10Q6VN20 620 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ARHGAP36Q6ZRI8 547 aa15.07■□□□□ 0
NUP54-217ENST00000514987 TNS4Q8IZW8 715 aa15.07■□□□□ 0
NUP54-217ENST00000514987 ATP6V0D2Q8N8Y2 350 aa15.07■□□□□ 0
NUP54-217ENST00000514987 SPATA22Q8NHS9 363 aa15.07■□□□□ 0
NUP54-217ENST00000514987 KCNV2Q8TDN2 545 aa15.07■□□□□ 0
NUP54-217ENST00000514987 SLC39A13Q96H72 371 aa15.07■□□□□ 0
NUP54-217ENST00000514987 RANBP9Q96S59 729 aa15.07■□□□□ 0
NUP54-217ENST00000514987 DRC3Q9H069 523 aa15.07■□□□□ 0
NUP54-217ENST00000514987 TASP1Q9H6P5 420 aa15.07■□□□□ 0
NUP54-217ENST00000514987 CAB39LQ9H9S4 337 aa15.07■□□□□ 0
NUP54-217ENST00000514987 GPAMQ9HCL2 828 aa15.07■□□□□ 0
NUP54-217ENST00000514987 VPS45Q9NRW7 570 aa15.07■□□□□ 0
NUP54-217ENST00000514987 OLA1Q9NTK5 396 aaKnown RBP15.07■□□□□ 0
NUP54-217ENST00000514987 ZNF358Q9NW07 568 aa15.07■□□□□ 0
NUP54-217ENST00000514987 COMMD8Q9NX08 183 aa15.07■□□□□ 0
NUP54-217ENST00000514987 IPO11Q9UI26 975 aaKnown RBP15.07■□□□□ 0
NUP54-217ENST00000514987 RAP2CQ9Y3L5 183 aa15.07■□□□□ 0
NUP54-217ENST00000514987 PCDHB5Q9Y5E4 795 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms