RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 CASQ2O14958 399 aaPredicted RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 SNUPNO95149 360 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 GABRB3P28472 473 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 CCNHP51946 323 aaPredicted RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 EPHB1P54762 984 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 MRPS6P82932 125 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 TBL3Q12788 808 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 ASPHQ12797 758 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 DQX1Q8TE96 717 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 PDCD6IPQ8WUM4 868 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 LENG8Q96PV6 779 aaPredicted RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 TRAPPC9Q96Q05 1148 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 HAPLN3Q96S86 360 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 APBA2Q99767 749 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 ACBD6Q9BR61 282 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 AP5M1Q9H0R1 490 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 MIOSQ9NXC5 875 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 LOC100653049A0A140TA62 436 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 E9PBE3 544 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 PEX1O43933 1283 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 KLHL41O60662 606 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 KRT34O76011 436 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 ANXA9O76027 345 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 IGHA2P01877 340 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 AHSGP02765 367 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 FESP07332 822 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 TFEBP19484 476 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 ABCG1P45844 678 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 GRIA4P48058 902 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 ARCN1P48444 511 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 AFF1P51825 1210 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 IRX1P78414 480 aaPredicted RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 PURAQ00577 322 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 CUL3Q13618 768 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 UPP1Q16831 310 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 SPRYD7Q5W111 196 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 SEL1L3Q68CR1 1132 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 DENND5AQ6IQ26 1287 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 POTEHQ6S545 545 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 OTOP3Q7RTS5 596 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 CTU1Q7Z7A3 348 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 ARHGAP12Q8IWW6 846 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 CENPLQ8N0S6 344 aaPredicted RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 LZTR1Q8N653 840 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 PYDC1Q8WXC3 89 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 MYLPFQ96A32 169 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 TBL1YQ9BQ87 522 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 TASP1Q9H6P5 420 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 SPATS2LQ9NUQ6 558 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 CPSF2Q9P2I0 782 aaKnown RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 CACNG4Q9UBN1 327 aa17.78■□□□□ 0.44
SNX2-213ENST00000514949 TIMM13Q9Y5L4 95 aaPredicted RBP17.78■□□□□ 0.44
SNX2-213ENST00000514949 TK2O00142 265 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 CYP11A1P05108 521 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 LYNP07948 512 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 USP10Q14694 798 aaKnown RBP17.77■□□□□ 0.44
SNX2-213ENST00000514949 ARL13AQ5H913 290 aaPredicted RBP17.77■□□□□ 0.44
SNX2-213ENST00000514949 BRMS1LQ5PSV4 323 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 ARTNQ5T4W7 220 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 MANEALQ5VSG8 457 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 RAPH1Q70E73 1250 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 MRPL10Q7Z7H8 261 aaKnown RBP17.77■□□□□ 0.44
SNX2-213ENST00000514949 SETD3Q86TU7 594 aaPredicted RBP17.77■□□□□ 0.44
SNX2-213ENST00000514949 HPS6Q86YV9 775 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 RP9Q8TA86 221 aaKnown RBP17.77■□□□□ 0.44
SNX2-213ENST00000514949 SLC26A7Q8TE54 656 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 TSNARE1Q96NA8 513 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 GPR78Q96P69 363 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 PKMYT1Q99640 499 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 YIPF3Q9GZM5 350 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 STK39Q9UEW8 545 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 ST3GAL5Q9UNP4 418 aa17.77■□□□□ 0.44
SNX2-213ENST00000514949 CCDC189A1A4V9 331 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 IQCA1LA6NCM1 817 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 GLTPD2A6NH11 291 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 ARL5CA6NH57 179 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 FGF10O15520 208 aaPredicted RBP17.77■□□□□ 0.43
SNX2-213ENST00000514949 GRID2O43424 1007 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 PDE5AO76074 875 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 CHRNGP07510 517 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 F7P08709 466 aaPredicted RBP17.77■□□□□ 0.43
SNX2-213ENST00000514949 PIK3R1P27986 724 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 ADRA1AP35348 466 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 BEX3Q00994 111 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 NSUN2Q08J23 767 aaKnown RBP eCLIP17.77■□□□□ 0.43
SNX2-213ENST00000514949 HERC3Q15034 1050 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 TIGD5Q53EQ6 642 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 ACAD11Q709F0 780 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 CELF6Q96J87 481 aaKnown RBP17.77■□□□□ 0.43
SNX2-213ENST00000514949 FAM192AQ9GZU8 254 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 GLOD4Q9HC38 313 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 UBP1Q9NZI7 540 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 ADAMTS6Q9UKP5 1117 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 ACOT9Q9Y305 439 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 TRPV2Q9Y5S1 764 aa17.77■□□□□ 0.43
SNX2-213ENST00000514949 MATN3O15232 486 aa17.76■□□□□ 0.43
SNX2-213ENST00000514949 AHCYL1O43865 530 aa17.76■□□□□ 0.43
SNX2-213ENST00000514949 UPP2O95045 317 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms