RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	NDST1	P52848	882 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	PPP2CB	P62714	309 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	PPP2CA	P67775	309 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	ZBED6	P86452	979 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	INCA1	Q0VD86	236 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	SMARCB1	Q12824	385 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	CUL2	Q13617	745 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	NFE2	Q16621	373 aa	Predicted RBP	6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	ARHGAP44	Q17R89	818 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	TMEM177	Q53S58	311 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	MDH1B	Q5I0G3	518 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	ATAT1	Q5SQI0	421 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	KLHDC7A	Q5VTJ3	777 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	CES5A	Q6NT32	575 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	DPY19L2P1	Q6NXN4	242 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	CYP26C1	Q6V0L0	522 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	ARHGEF18	Q6ZSZ5	1173 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	ACOT1	Q86TX2	421 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	UNC93A	Q86WB7	457 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	REXO1L1P	Q8IX06	675 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	C17orf53	Q8N3J3	647 aa	Predicted RBP	6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	PPM1K	Q8N3J5	372 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	TTC9B	Q8N6N2	239 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	B3GALNT2	Q8NCR0	500 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	C2orf15	Q8WU43	125 aa	Known RBP	6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	SMG7	Q92540	1137 aa	Known RBP	6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	AJUBA	Q96IF1	538 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	SPAG5	Q96R06	1193 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	TWNK	Q96RR1	684 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	RBM15	Q96T37	977 aa	Known RBP eCLIP	6.9	□□□□□ -1.3	3e-6	■■■■□ 23.4
HIPK1-210	ENST00000514621	NUP58	Q9BVL2	599 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	RHOBTB2	Q9BYZ6	727 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	ELOVL4	Q9GZR5	314 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	CISH	Q9NSE2	258 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	GALNT8	Q9NY28	637 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	HSFX1	Q9UBD0	423 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	DNAJC12	Q9UKB3	198 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	CAPN11	Q9UMQ6	739 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	LUC7L2	Q9Y383	392 aa	Known RBP	6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	YIPF1	Q9Y548	306 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	INSL5	Q9Y5Q6	135 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	PRUNE2	Q8WUY3	3088 aa		6.9	□□□□□ -1.3
HIPK1-210	ENST00000514621	FAM170A	A1A519	330 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621		F8VZ95	297 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	GFPT2	O94808	682 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	PLEK	P08567	350 aa	Predicted RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	SKIL	P12757	684 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	ACO1	P21399	889 aa	Known RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	TBXAS1	P24557	533 aa	Predicted RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	CYP2F1	P24903	491 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	IGFALS	P35858	605 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	MTHFR	P42898	656 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	MAGEA11	P43364	429 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	ALDH1A3	P47895	512 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	TUFM	P49411	452 aa	Known RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	GPR15	P49685	360 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	RAD23B	P54727	409 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	TWF1	Q12792	350 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	MTF1	Q14872	753 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	MAPRE1	Q15691	268 aa	Known RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	ASIC2	Q16515	512 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	MGAT5B	Q3V5L5	792 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	CFAP221	Q4G0U5	840 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	TDRD12	Q587J7	1177 aa	Known RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	CPZ	Q66K79	652 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	ABHD17C	Q6PCB6	329 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	C4orf50	Q6ZRC1	276 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	SPATA2L	Q8IUW3	424 aa	Predicted RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	TMEM139	Q8IV31	216 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	CRYBG2	Q8N1P7	616 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	TTC39C	Q8N584	583 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	UBR7	Q8N806	425 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	C12orf29	Q8N999	325 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	ZNF397	Q8NF99	534 aa	Predicted RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	SPPL2B	Q8TCT7	592 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	MYLPF	Q96A32	169 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	PCED1B	Q96HM7	432 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	FUBP3	Q96I24	572 aa	Known RBP eCLIP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	TNIP3	Q96KP6	325 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	RIPOR3	Q96MK2	946 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	NECTIN4	Q96NY8	510 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	PANX2	Q96RD6	677 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	SEPT5	Q99719	369 aa	Predicted RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	BAG1	Q99933	345 aa	Predicted RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	DESI2	Q9BSY9	194 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	B3GNT5	Q9BYG0	378 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	POMK	Q9H5K3	350 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	FAM124B	Q9H5Z6	455 aa	Predicted RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	WDR6	Q9NNW5	1121 aa	Known RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	UBE2T	Q9NPD8	197 aa	Predicted RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	PLCB1	Q9NQ66	1216 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	HCFC1R1	Q9NWW0	138 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	DNMT3B	Q9UBC3	853 aa	Known RBP	6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	FAM50B	Q9Y247	325 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	ZKSCAN5	Q9Y2L8	839 aa		6.89	□□□□□ -1.31
HIPK1-210	ENST00000514621	CLDN5	O00501	218 aa		6.88	□□□□□ -1.31
HIPK1-210	ENST00000514621	CALCA	P01258	141 aa		6.88	□□□□□ -1.31
HIPK1-210	ENST00000514621	ASL	P04424	464 aa		6.88	□□□□□ -1.31
HIPK1-210	ENST00000514621	KRT5	P13647	590 aa		6.88	□□□□□ -1.31
HIPK1-210	ENST00000514621	CCDC130	P13994	396 aa		6.88	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms