RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 GPD1LQ8N335 351 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 KYQ8NBH2 561 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 KIAA0895Q8NCT3 520 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 DNASE1L2Q92874 299 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 CLDN23Q96B33 292 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 ZBTB8AQ96BR9 441 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 ZNF560Q96MR9 790 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 ZNF396Q96N95 335 aaPredicted RBP6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 TSPAN18Q96SJ8 248 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 C7orf25Q9BPX7 421 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 MRPL45Q9BRJ2 306 aaKnown RBP6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 SLC46A2Q9BY10 475 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 CDH19Q9H159 772 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 TNMDQ9H2S6 317 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 KCTD10Q9H3F6 313 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 DPEP3Q9H4B8 488 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 TRPV4Q9HBA0 871 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 PRMT8Q9NR22 394 aaPredicted RBP6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 AGPAT3Q9NRZ7 376 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 INTS13Q9NVM9 706 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 DDX43Q9NXZ2 648 aaKnown RBP6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 GTF3C4Q9UKN8 822 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 TMPRSS11EQ9UL52 423 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 MAFFQ9ULX9 164 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 MAGED2Q9UNF1 606 aaPredicted RBP6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 EXOC7Q9UPT5 735 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 INVSQ9Y283 1065 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 NCOR2Q9Y618 2525 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 PLXND1Q9Y4D7 1925 aa6.78□□□□□ -1.32
HMGN1P17-201ENST00000513734 A0A1B0GVL5 298 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 C2orf78A6NCI8 922 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 ZNF263O14978 683 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 TMEM191BP0C7N4 346 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 DLATP10515 647 aaKnown RBP6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 OSMP13725 252 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 ARSAP15289 507 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 ABCD1P33897 745 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 RAP1GAPP47736 663 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 LGALS4P56470 323 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 KRT85P78386 507 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 CD83Q01151 205 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 SATB1Q01826 763 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 CYP24A1Q07973 514 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 FCHO2Q0JRZ9 810 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 SRSF5Q13243 272 aaKnown RBP6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 ALCAMQ13740 583 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 TRIM25Q14258 630 aaKnown RBP6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 PON2Q15165 354 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 SNRNP35Q16560 246 aaKnown RBP6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 LPAL2Q16609 132 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 WDR72Q3MJ13 1102 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 LIMS2Q7Z4I7 341 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 KIAA2013Q8IYS2 634 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 LRRC52Q8N7C0 313 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 LINC00482Q8N8I6 264 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 MAB21L3Q8N8X9 362 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 IQUBQ8NA54 791 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 SUMF1Q8NBK3 374 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 LEMD2Q8NC56 503 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 KCNG4Q8TDN1 519 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 DEPDC1BQ8WUY9 529 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 JPH3Q8WXH2 748 aaPredicted RBP6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 FAM3CQ92520 227 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 JADE3Q92613 823 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 USP13Q92995 863 aaPredicted RBP6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 MYLPFQ96A32 169 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 CCDC127Q96BQ5 260 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 HPDLQ96IR7 371 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 RAX2Q96IS3 184 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 GOLPH3LQ9H4A5 285 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 HPS4Q9NQG7 708 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 KCND1Q9NSA2 647 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 GDAP2Q9NXN4 497 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 ITGA11Q9UKX5 1188 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 USP18Q9UMW8 372 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 GPR45Q9Y5Y3 372 aa6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 TP53BP1Q12888 1972 aaPredicted RBP6.77□□□□□ -1.33
HMGN1P17-201ENST00000513734 ZNF233A6NK53 670 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 SPECC1L-ADORA2AF8WAN1 911 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 ETV2O00321 342 aaPredicted RBP6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 CLDN5O00501 218 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 EIF3DO15371 548 aaKnown RBP eCLIP6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 LAMTOR5O43504 91 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 HUS1O60921 280 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 HSP90AA1P07900 732 aaKnown RBP6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 CHRNB1P11230 501 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 PFKFB1P16118 471 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 BDNFP23560 247 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 PNPLA4P41247 253 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 RPS9P46781 194 aaKnown RBP6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 MYL6P60660 151 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 RBP5P82980 135 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 ZXDBP98169 803 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 TSPY1Q01534 308 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 POU5F1Q01860 360 aaKnown RBP6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 NFATC3Q12968 1075 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 STK4Q13043 487 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 VEPH1Q14D04 833 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 STILQ15468 1287 aa6.76□□□□□ -1.33
HMGN1P17-201ENST00000513734 KANK2Q63ZY3 851 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms