RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 CHST12Q9NRB3 414 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 RBM22Q9NW64 420 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLOCK-211ENST00000513440 ABI2Q9NYB9 513 aaPredicted RBP14.28□□□□□ -0.12
CLOCK-211ENST00000513440 PCDHB12Q9Y5F1 795 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 CDY1Q9Y6F8 540 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 BPTFQ12830 3046 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 EME2A4GXA9 379 aaPredicted RBP14.28□□□□□ -0.12
CLOCK-211ENST00000513440 ZNF195O14628 629 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 GABRB3P28472 473 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 ASPHQ12797 758 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 CBLBQ13191 982 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 NAB1Q13506 487 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 FAM91A1Q658Y4 838 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 LDB1Q86U70 411 aaPredicted RBP14.28□□□□□ -0.12
CLOCK-211ENST00000513440 SNX31Q8N9S9 440 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 SREK1Q8WXA9 508 aaKnown RBP14.28□□□□□ -0.12
CLOCK-211ENST00000513440 USP13Q92995 863 aaPredicted RBP14.28□□□□□ -0.12
CLOCK-211ENST00000513440 FAM136AQ96C01 138 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 NXNL1Q96CM4 212 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 FCRL2Q96LA5 508 aaPredicted RBP14.28□□□□□ -0.12
CLOCK-211ENST00000513440 ZNF184Q99676 751 aaPredicted RBP14.28□□□□□ -0.12
CLOCK-211ENST00000513440 TBL1YQ9BQ87 522 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 TCF7L2Q9NQB0 619 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 DONSONQ9NYP3 566 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 XPR1Q9UBH6 696 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 SF3B1O75533 1304 aaKnown RBP eCLIP14.28□□□□□ -0.122e-6■■■■■ 91.7
CLOCK-211ENST00000513440 NCAM2O15394 837 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 TIMM44O43615 452 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 MT-CO1P00395 513 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 HMBSP08397 361 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 ODC1P11926 461 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 ITGAXP20702 1163 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 UPP1Q16831 310 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 INSCQ1MX18 579 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 RNF220Q5VTB9 566 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 SNX32Q86XE0 403 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 CEP97Q8IW35 865 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 CASP10Q92851 521 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 KLHL5Q96PQ7 755 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 BRD8Q9H0E9 1235 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 DNAJC28Q9NX36 388 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 ZNF212Q9UDV6 495 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 TRHDEQ9UKU6 1024 aa14.28□□□□□ -0.12
CLOCK-211ENST00000513440 TXNDC9O14530 226 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 F9P00740 461 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 COX4I1P13073 169 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 TCN1P20061 433 aaPredicted RBP14.27□□□□□ -0.12
CLOCK-211ENST00000513440 HARS2P49590 506 aaKnown RBP14.27□□□□□ -0.12
CLOCK-211ENST00000513440 GPR15P49685 360 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 ZNF157P51786 506 aaPredicted RBP14.27□□□□□ -0.12
CLOCK-211ENST00000513440 SCAPQ12770 1279 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 ANO4Q32M45 955 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 ZNF470Q6ECI4 717 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 OVOS1Q6IE37 1185 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 TMEM86AQ8N2M4 240 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 DMAP1Q9NPF5 467 aaPredicted RBP14.27□□□□□ -0.12
CLOCK-211ENST00000513440 CDH22Q9UJ99 828 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 SSX2IPQ9Y2D8 614 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 LRCH1Q9Y2L9 728 aa14.27□□□□□ -0.12
CLOCK-211ENST00000513440 MPOP05164 745 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 PKNOX1P55347 436 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 KLF10Q13118 480 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 TBCCQ15814 346 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 RAB41Q5JT25 222 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 STXBP5Q5T5C0 1151 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 TAF2Q6P1X5 1199 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 C14orf80Q86SX3 495 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 ZC3HC1Q86WB0 502 aaKnown RBP14.27□□□□□ -0.13
CLOCK-211ENST00000513440 FSTL5Q8N475 847 aaPredicted RBP14.27□□□□□ -0.13
CLOCK-211ENST00000513440 CMTM5Q96DZ9 223 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 ILKAPQ9H0C8 392 aaPredicted RBP14.27□□□□□ -0.13
CLOCK-211ENST00000513440 TRPV6Q9H1D0 765 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 GTSE1Q9NYZ3 720 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 ZDHHC2Q9UIJ5 367 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 PADI3Q9ULW8 664 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 TTC3P53804 2025 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 HNRNPLP14866 589 aaKnown RBP eCLIP14.27□□□□□ -0.135e-6■■■■□ 19.4
CLOCK-211ENST00000513440 NPY2RP49146 381 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 SLC5A3P53794 718 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 ARPP19P56211 112 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 TMC7Q7Z402 723 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 MYLK4Q86YV6 388 aaPredicted RBP14.27□□□□□ -0.13
CLOCK-211ENST00000513440 PABPC5Q96DU9 382 aaKnown RBP14.27□□□□□ -0.13
CLOCK-211ENST00000513440 ADAM2Q99965 735 aa14.27□□□□□ -0.13
CLOCK-211ENST00000513440 CORO1CQ9ULV4 474 aaPredicted RBP14.27□□□□□ -0.13
CLOCK-211ENST00000513440 BUD23O43709 281 aaKnown RBP14.26□□□□□ -0.13
CLOCK-211ENST00000513440 HLA-DQB2P05538 268 aa14.26□□□□□ -0.13
CLOCK-211ENST00000513440 ENO3P13929 434 aaPredicted RBP14.26□□□□□ -0.13
CLOCK-211ENST00000513440 TSPAN8P19075 237 aa14.26□□□□□ -0.13
CLOCK-211ENST00000513440 ETFBP38117 255 aa14.26□□□□□ -0.13
CLOCK-211ENST00000513440 CCNHP51946 323 aaPredicted RBP14.26□□□□□ -0.13
CLOCK-211ENST00000513440 TRIM32Q13049 653 aa14.26□□□□□ -0.13
CLOCK-211ENST00000513440 INTS6LQ5JSJ4 861 aaKnown RBP14.26□□□□□ -0.13
CLOCK-211ENST00000513440 SPATA2LQ8IUW3 424 aaPredicted RBP14.26□□□□□ -0.13
CLOCK-211ENST00000513440 MFSD6LQ8IWD5 586 aa14.26□□□□□ -0.13
CLOCK-211ENST00000513440 TRPV1Q8NER1 839 aa14.26□□□□□ -0.13
CLOCK-211ENST00000513440 RRAGCQ9HB90 399 aa14.26□□□□□ -0.13
CLOCK-211ENST00000513440 ADAM28Q9UKQ2 775 aa14.26□□□□□ -0.13
CLOCK-211ENST00000513440 PTCH2Q9Y6C5 1203 aa14.26□□□□□ -0.13
CLOCK-211ENST00000513440 FAM95CA0A1B0GW59 222 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms