RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 CBWD5Q5RIA9 395 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 KLC3Q6P597 504 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 USP17L6PQ6QN14 398 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 GADL1Q6ZQY3 521 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 AMZ2Q86W34 360 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 DHX40Q8IX18 779 aaKnown RBP6.41□□□□□ -1.38
CHD1-208ENST00000512392 CCDC65Q8IXS2 484 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 YAF2Q8IY57 180 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 RAPGEF4Q8WZA2 1011 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 PEX13Q92968 403 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 INTS12Q96CB8 462 aaKnown RBP6.41□□□□□ -1.38
CHD1-208ENST00000512392 SGF29Q96ES7 293 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 PAFAH2Q99487 392 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 SH3GL1Q99961 368 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 GPR61Q9BZJ8 451 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 TRIM2Q9C040 744 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 XKR8Q9H6D3 395 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 RIC8BQ9NVN3 520 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 BEX4Q9NWD9 120 aaPredicted RBP6.41□□□□□ -1.38
CHD1-208ENST00000512392 LRIT1Q9P2V4 623 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 OSGIN1Q9UJX0 560 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 VAV3Q9UKW4 847 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 PPIEQ9UNP9 301 aaKnown RBP6.41□□□□□ -1.38
CHD1-208ENST00000512392 NUDCQ9Y266 331 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 R3HDM2Q9Y2K5 976 aaKnown RBP6.41□□□□□ -1.38
CHD1-208ENST00000512392 LIPGQ9Y5X9 500 aa6.41□□□□□ -1.38
CHD1-208ENST00000512392 DDX49Q9Y6V7 483 aaKnown RBP6.41□□□□□ -1.38
CHD1-208ENST00000512392 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.4□□□□□ -1.38
CHD1-208ENST00000512392 MBD3L4A6NDZ8 208 aaPredicted RBP6.4□□□□□ -1.38
CHD1-208ENST00000512392 MBD3L3A6NE82 208 aaPredicted RBP6.4□□□□□ -1.38
CHD1-208ENST00000512392 PRAMEF25A6NGN4 478 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 GNAT3A8MTJ3 354 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 H7C4K7 107 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 VNN2O95498 520 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 GSTM1P09488 218 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 ARP10275 920 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 ABCG1P45844 678 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 SLC11A2P49281 568 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 PRRX1P54821 245 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 LIPEQ05469 1076 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 TEFQ10587 303 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 KCNC3Q14003 757 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 RAB39AQ14964 217 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 NOLC1Q14978 699 aaKnown RBP eCLIP6.4□□□□□ -1.38
CHD1-208ENST00000512392 ZNF766Q5HY98 468 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 SFRP5Q5T4F7 317 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 MRNIPQ6NTE8 343 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 CORO6Q6QEF8 472 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 C22orf34Q6ZV56 151 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 VASH2Q86V25 355 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 ZNF679Q8IYX0 411 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 KRT222Q8N1A0 295 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 XXYLT1Q8NBI6 393 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 RBM15BQ8NDT2 890 aaKnown RBP6.4□□□□□ -1.38
CHD1-208ENST00000512392 DBF4BQ8NFT6 615 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 HMGB4Q8WW32 186 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 MPHOSPH9Q99550 1183 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 ZSCAN5AQ9BUG6 496 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 FAM114A2Q9NRY5 505 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 FAM212BQ9NTI7 297 aaPredicted RBP6.4□□□□□ -1.38
CHD1-208ENST00000512392 DNAJB11Q9UBS4 358 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 MKLN1Q9UL63 735 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 CA14Q9ULX7 337 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 EXOC6BQ9Y2D4 811 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 GDAQ9Y2T3 454 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 NEU2Q9Y3R4 380 aa6.4□□□□□ -1.38
CHD1-208ENST00000512392 A0A087WWL8 130 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 GSAPA4D1B5 854 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 LDLRAD4O15165 306 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 DHHO43323 396 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 WEE2P0C1S8 567 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 DLATP10515 647 aaKnown RBP6.4□□□□□ -1.39
CHD1-208ENST00000512392 PLTPP55058 493 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 OXCT1P55809 520 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 UCP3P55916 312 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 WNT3P56703 355 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 TIRAPP58753 221 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 STX1BP61266 288 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 DDX39BQ13838 428 aaKnown RBP6.4□□□□□ -1.39
CHD1-208ENST00000512392 RRS1Q15050 365 aaKnown RBP6.4□□□□□ -1.39
CHD1-208ENST00000512392 SGCBQ16585 318 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 FCRLBQ6BAA4 426 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 KCTD20Q7Z5Y7 419 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 NLGN4XQ8N0W4 816 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 CAMKVQ8NCB2 501 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 C7orf57Q8NEG2 295 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 GPR156Q8NFN8 814 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 OR8K3Q8NH51 312 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 SPSB4Q96A44 273 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 DHTKD1Q96HY7 919 aaPredicted RBP6.4□□□□□ -1.39
CHD1-208ENST00000512392 HNRNPABQ99729 332 aaKnown RBP6.4□□□□□ -1.39
CHD1-208ENST00000512392 LDAHQ9H6V9 325 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 TMEM165Q9HC07 324 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 ANKMY1Q9P2S6 941 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 FBXL17Q9UF56 701 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 ACSL6Q9UKU0 697 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 BTBD3Q9Y2F9 522 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 C15orf41Q9Y2V0 281 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 PCDHA10Q9Y5I2 948 aa6.4□□□□□ -1.39
CHD1-208ENST00000512392 MFSD2BA6NFX1 497 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms