RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-267	ENST00000512336		A0A1W2PQ64	194 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	TCAF2	A6NFQ2	919 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	PLD2	O14939	933 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	RAD51B	O15315	384 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	PPFIA2	O75334	1257 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	FBXO21	O94952	628 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	SFTPC	P11686	197 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	JUND	P17535	347 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	RPL13	P26373	211 aa	Known RBP	12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	INHBC	P55103	352 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	MCCD1	P59942	119 aa	Predicted RBP	12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	YWHAE	P62258	255 aa	Known RBP	12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	CENPC	Q03188	943 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	SPIDR	Q14159	915 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	FGL2	Q14314	439 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	TBR1	Q16650	682 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	CBWD6	Q4V339	395 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	CBWD3	Q5JTY5	395 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	CBWD5	Q5RIA9	395 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	TPRG1L	Q5T0D9	272 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	SYPL2	Q5VXT5	272 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	B3GNT8	Q7Z7M8	397 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	FBXO39	Q8N4B4	442 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	WDR48	Q8TAF3	677 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	FAM174A	Q8TBP5	190 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	LIN37	Q96GY3	246 aa	Predicted RBP	12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	BTN2A3P	Q96KV6	586 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	HSFY1	Q96LI6	401 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	IL12RB2	Q99665	862 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	PRMT1	Q99873	361 aa	Known RBP	12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	SEMA3C	Q99985	751 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	CCDC3	Q9BQI4	270 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	BOC	Q9BWV1	1114 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	RBSN	Q9H1K0	784 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	EPB41L5	Q9HCM4	733 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	DYRK4	Q9NR20	520 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	HS3ST3A1	Q9Y663	406 aa		12.5	□□□□□ -0.41
DDR1-267	ENST00000512336	RIOK3	O14730	519 aa	Known RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	TPP1	O14773	563 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	STX10	O60499	249 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	PAK4	O96013	591 aa	Predicted RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	MT-CO1	P00395	513 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	CALCA	P01258	141 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	SRC	P12931	536 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	HGF	P14210	728 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	CR2	P20023	1033 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	BRD2	P25440	801 aa	Known RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	CHRNA3	P32297	505 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	UGT1A5	P35504	534 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	ME1	P48163	572 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	IRAK1	P51617	712 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	OXCT1	P55809	520 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	C1QBP	Q07021	282 aa	Known RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	CCDC15	Q0P6D6	951 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	LRMP	Q12912	555 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	PDE1C	Q14123	709 aa	Predicted RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	ERN2	Q76MJ5	926 aa	Known RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	RAB11FIP2	Q7L804	512 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	VASH2	Q86V25	355 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	RBFA	Q8N0V3	343 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	ATP6V0D2	Q8N8Y2	350 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	CHST14	Q8NCH0	376 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	OR2A12	Q8NGT7	310 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	NAT6	Q93015	286 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	RNF34	Q969K3	372 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	FEM1A	Q9BSK4	669 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	SLC17A9	Q9BYT1	436 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	TCEAL2	Q9H3H9	227 aa	Predicted RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	IPO11	Q9UI26	975 aa	Known RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	VPS28	Q9UK41	221 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	ACSL6	Q9UKU0	697 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	PCDHGA4	Q9Y5G9	962 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	OR51B4	Q9Y5P0	310 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	NOTCH2	Q04721	2471 aa		12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	SPTAN1	Q13813	2472 aa	Known RBP	12.49	□□□□□ -0.41
DDR1-267	ENST00000512336	RP1	P56715	2156 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	KCNU1	A8MYU2	1149 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	NTN3	O00634	580 aa	Predicted RBP	12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	SPINT1	O43278	529 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	GCAT	O75600	419 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	PAEP	P09466	180 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	LIPC	P11150	499 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	WT1	P19544	449 aa	Predicted RBP	12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	RABIF	P47224	123 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	RPIA	P49247	311 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	CYP4F2	P78329	520 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	PITX1	P78337	314 aa	Predicted RBP	12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	EIF2B5	Q13144	721 aa	Known RBP	12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	C1orf61	Q13536	156 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	CLCA4	Q14CN2	919 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	CNGA2	Q16280	664 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	ZCWPW2	Q504Y3	356 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	RABGAP1L	Q5R372	815 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	MANEA	Q5SRI9	462 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	TMEM270	Q6UE05	265 aa		12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	RBM43	Q6ZSC3	357 aa	Known RBP	12.48	□□□□□ -0.41
DDR1-267	ENST00000512336	TMIE	Q8NEW7	156 aa		12.48	□□□□□ -0.41

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