RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 PUM1Q14671 1186 aaKnown RBP eCLIP4.55□□□□□ -1.682e-18■□□□□ 10.8
MATR3-219ENST00000512040 KRT31Q15323 416 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SHHQ15465 462 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 TAF5Q15542 800 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SMAD1Q15797 465 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 ZYXQ15942 572 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 NFIL3Q16649 462 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 CCDC142Q17RM4 750 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SMU1Q2TAY7 513 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 ADCK5Q3MIX3 580 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 TRIM61Q5EBN2 209 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 TCP11X2Q5H9J9 407 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 EFHC1Q5JVL4 640 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 RBM20Q5T481 1227 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 FOXB2Q5VYV0 432 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SLC30A9Q6PML9 568 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SLC2A7Q6PXP3 512 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 C6orf15Q6UXA7 325 aaPredicted RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 KDM7AQ6ZMT4 941 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 TRIM72Q6ZMU5 477 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 PLEKHH3Q7Z736 793 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 TAF8Q7Z7C8 310 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 ASPGQ86U10 573 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 AKAP14Q86UN6 197 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 PDZD3Q86UT5 571 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 ALYREFQ86V81 257 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 GATAD2AQ86YP4 633 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 CPOQ8IVL8 374 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 KIAA2013Q8IYS2 634 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 ST13P4Q8IZP2 240 aaPredicted RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 ABRAQ8N0Z2 381 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 BBS5Q8N3I7 341 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 FBXW8Q8N3Y1 598 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 ZBTB34Q8NCN2 500 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SLC24A4Q8NFF2 622 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 OR2W6PQ8NHA6 318 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SMARCC2Q8TAQ2 1214 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 ATL1Q8WXF7 558 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 AUTS2Q8WXX7 1259 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 STARD8Q92502 1023 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 RFKQ969G6 155 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 RAB7BQ96AH8 199 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 LENG1Q96BZ8 264 aaPredicted RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 EDC3Q96F86 508 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 MED30Q96HR3 178 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 IFT74Q96LB3 600 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 FGD4Q96M96 766 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 FAM20AQ96MK3 541 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 NOX5Q96PH1 765 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 NR1H4Q96RI1 486 aaPredicted RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 CDK5RAP1Q96SZ6 601 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 CDRT15Q96T59 188 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 RAD9AQ99638 391 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 ACO2Q99798 780 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 CIB1Q99828 191 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 GORASP1Q9BQQ3 440 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 CCDC77Q9BR77 488 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 PDCD2LQ9BRP1 358 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 NUP85Q9BW27 656 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 LRRC3Q9BY71 257 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 MRPL37Q9BZE1 423 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 GPR62Q9BZJ7 368 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 PITHD1Q9GZP4 211 aaPredicted RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 FAM107BQ9H098 131 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 THAP2Q9H0W7 228 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 NAPBQ9H115 298 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 MRPL44Q9H9J2 332 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 NTN4Q9HB63 628 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SPACA1Q9HBV2 294 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SARS2Q9NP81 518 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 DECR2Q9NUI1 292 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 KLHL9Q9P2J3 617 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 ASIC3Q9UHC3 531 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 DPP7Q9UHL4 492 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 IPO11Q9UI26 975 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 ITGA11Q9UKX5 1188 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 VANGL2Q9ULK5 521 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 SLC8A2Q9UPR5 921 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 CAMK2AQ9UQM7 478 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 CHMP2BQ9UQN3 213 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 TNFSF13BQ9Y275 285 aa4.55□□□□□ -1.68
MATR3-219ENST00000512040 BZW2Q9Y6E2 419 aaKnown RBP4.55□□□□□ -1.68
MATR3-219ENST00000512040 ATG2AQ2TAZ0 1938 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 PLIN4Q96Q06 1357 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 ZNF536O15090 1300 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 ELP1O95163 1332 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 ZMYM6O95789 1325 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 A0A0A6YYJ9 748 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 SLC15A5A6NIM6 579 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 A8MXE2 369 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 NUDT19A8MXV4 375 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 C1QTNF9BB2RNN3 333 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 SLCO1B7G3V0H7 640 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 H0YAE9 185 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 SMIM22K7EJ46 135 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 HIP1O00291 1037 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 KMOO15229 486 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 FFAR2O15552 330 aa4.54□□□□□ -1.68
MATR3-219ENST00000512040 PRKAB2O43741 272 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms