RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ANKRD20A3Q5VUR7 823 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TTC19Q6DKK2 380 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 JADE1Q6IE81 842 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADGRD1Q6QNK2 874 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RNF165Q6ZSG1 346 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT74Q7RTS7 529 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF720Q7Z2F6 126 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 LIX1LQ8IVB5 337 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM217AQ8IXS0 508 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MARVELD2Q8N4S9 558 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RNF10Q8N5U6 811 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM160A2Q8N612 972 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANKRD52Q8NB46 1076 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 BCL7CQ8WUZ0 217 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRMT6Q96LA8 375 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM81BQ96LP2 452 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDCA3Q99618 268 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 EMILIN2Q9BXX0 1053 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 Q9H521 79 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 IKZF5Q9H5V7 419 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RSAD1Q9HA92 442 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 LZTFL1Q9NQ48 299 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SERHLQ9NQF3 203 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SYBUQ9NX95 663 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 THEGQ9P2T0 379 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC17A7Q9P2U7 560 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RSPH14Q9UHP6 348 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TTF2Q9UNY4 1162 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF232Q9UNY5 417 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 DOLKQ9UPQ8 538 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 NUB1Q9Y5A7 615 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 EPPK1P58107 5090 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 APOBP04114 4563 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 A0A1W2PPM1 405 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TCRBV3S1A0A5B6 114 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGAP10A1A4S6 786 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCT8L1PA6NM43 557 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 BTBD11A6QL63 1104 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RHPN2P1A8MT19 583 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GFYI3L273 518 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPTLC1O15269 473 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MCF2P10911 925 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSMC3P17980 439 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT4P19013 534 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PLCG1P19174 1290 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MMP8P22894 467 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRPAP1P30533 357 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CHRNB4P30926 498 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GGT5P36269 586 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGDIAP52565 204 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCNA1P78396 465 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MRPS15P82914 257 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TSNAXIP1Q2TAA8 658 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 OTOAQ7RTW8 1153 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADGRG3Q86Y34 549 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 KDM1BQ8NB78 822 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPATA5Q8NB90 893 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 NCOA7Q8NI08 942 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CPT1BQ92523 772 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIM11Q96F44 468 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC46Q96FV0 321 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 VPS39Q96JC1 886 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM87BQ96K49 555 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCDC42Q96M95 316 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 XPO6Q96QU8 1125 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 NUP88Q99567 741 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MYD88Q99836 296 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 HINFPQ9BQA5 517 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CNPPD1Q9BV87 410 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLITRK6Q9H5Y7 841 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 STX18Q9P2W9 335 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 STK39Q9UEW8 545 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 HMGXB4Q9UGU5 601 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATPIF1Q9UII2 106 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CPSF3Q9UKF6 684 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 EDARQ9UNE0 448 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PLCL2Q9UPR0 1127 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAGED1Q9Y5V3 778 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ACTL7BQ9Y614 415 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GJA3Q9Y6H8 435 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 EPN1Q9Y6I3 576 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 DNMT3AQ9Y6K1 912 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 STON1Q9Y6Q2 735 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 KIF26BQ2KJY2 2108 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SAC3D1A6NKF1 404 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZBBXA8MT70 800 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 NEMP1O14524 444 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCDH8O95206 1070 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GSTA1P08263 222 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GSTA2P09210 222 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 UBTFL1P0CB47 393 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCDC166P0CW27 439 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARP10275 920 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CYP2C9P11712 490 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PLCG2P16885 1265 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF24P17028 368 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCNE1P24864 410 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 STAT3P40763 770 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms