RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SRSF2Q01130 221 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TMEM62Q0P6H9 643 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 LMAN2Q12907 356 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DCTN2Q13561 401 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 USH1GQ495M9 461 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 FAM111BQ6SJ93 734 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 H1FNTQ75WM6 255 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 NLRP9Q7RTR0 991 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DIS3L2Q8IYB7 885 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TDRD5Q8NAT2 981 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PIK3C3Q8NEB9 887 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 AKR7LQ8NHP1 331 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CLHC1Q8NHS4 586 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 ST7LQ8TDW4 575 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 IGDCC4Q8TDY8 1250 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TRPC4APQ8TEL6 797 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 KAT2BQ92831 832 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PTPRN2Q92932 1015 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 MR1Q95460 341 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 HNRNPABQ99729 332 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 SELENOSQ9BQE4 189 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 FAM83CQ9BQN1 747 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CARD6Q9BX69 1037 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TDRD1Q9BXT4 1180 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 UBXN6Q9BZV1 441 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PORCNQ9H237 461 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 EVA1AQ9H8M9 152 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAVER2Q9HCJ3 691 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 C8orf4Q9NR00 106 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 RBPJLQ9UBG7 517 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TUBGCP4Q9UGJ1 667 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TTC7AQ9ULT0 858 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 RUVBL1Q9Y265 456 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DLGAP4Q9Y2H0 992 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TRPV2Q9Y5S1 764 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CASP8AP2Q9UKL3 1982 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 LAMA4Q16363 1823 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 HEATR9A2RTY3 570 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SOCS6O14544 535 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TNPO2O14787 897 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TO15178 435 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CASC3O15234 703 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 GPRIN2O60269 458 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 FKTNO75072 461 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PPP6R2O75170 966 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 DLGAP3O95886 979 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 LMNAP02545 664 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ODC1P11926 461 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ANPEPP15144 967 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 H2AFXP16104 143 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CTGFP29279 349 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ME1P48163 572 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 LACTBP83111 547 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PTK6Q13882 451 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PUM1Q14671 1186 aaKnown RBP eCLIP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 USP10Q14694 798 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TMEM132BQ14DG7 1078 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SMTNL2Q2TAL5 461 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZRANB3Q5FWF4 1079 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PPP6R3Q5H9R7 873 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 RNFT1Q5M7Z0 435 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 GARNL3Q5VVW2 1013 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SNRNP48Q6IEG0 339 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCDC62Q6P9F0 684 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TUBA3EQ6PEY2 450 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TRIM65Q6PJ69 517 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ADGRD1Q6QNK2 874 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 C17orf99Q6UX52 265 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CRELD2Q6UXH1 353 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TAS2R42Q7RTR8 314 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 DSG4Q86SJ6 1040 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TPRA1Q86W33 373 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SCN4BQ8IWT1 228 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PHACTR4Q8IZ21 702 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ADSSL1Q8N142 457 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 RTL3Q8N8U3 475 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ANKFN1Q8N957 763 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 GPRC5AQ8NFJ5 357 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SCFD2Q8WU76 684 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC9A6Q92581 669 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ABHD17AQ96GS6 310 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 C12orf42Q96LP6 360 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PPP1R10Q96QC0 940 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PLIN2Q99541 437 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 MIPEPQ99797 713 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ORAI3Q9BRQ5 295 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 GPR61Q9BZJ8 451 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 RC3H2Q9HBD1 1191 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SAYSD1Q9NPB0 183 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CYTH4Q9UIA0 394 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 APPL1Q9UKG1 709 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CNOT11Q9UKZ1 510 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 OGDHLQ9ULD0 1010 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 AGAP1Q9UPQ3 857 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 NR2E3Q9Y5X4 410 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PTPRFP10586 1907 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 MYH4Q9Y623 1939 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 LOC100506127A0A0U1RQW1 187 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 A0A1W2PP55 124 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 GOLGA6L10A6NI86 522 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms