RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ARL14Q8N4G2 192 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 SLC35C1Q96A29 364 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 ST7Q9NRC1 585 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 WDR70Q9NW82 654 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 HS3ST2Q9Y278 367 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 HS3ST3A1Q9Y663 406 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 CSNK1G3Q9Y6M4 447 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 MYO9AB2RTY4 2548 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 UNC13CQ8NB66 2214 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 CCDC187A0A096LP49 1063 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 TCEA3O75764 348 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 PAK4O96013 591 aaPredicted RBP19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 WT1P19544 449 aaPredicted RBP19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 CMA1P23946 247 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 TBXAS1P24557 533 aaPredicted RBP19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 SLC5A2P31639 672 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 NR0B2Q15466 257 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 ERN2Q76MJ5 926 aaKnown RBP19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 PARGQ86W56 976 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 ATP6V0D2Q8N8Y2 350 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 TMIEQ8NEW7 156 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 GRIN3AQ8TCU5 1115 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 LMX1AQ8TE12 382 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 KLF6Q99612 283 aaPredicted RBP19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 BOCQ9BWV1 1114 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 EVA1BQ9NVM1 165 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 USP25Q9UHP3 1055 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 SALL4Q9UJQ4 1053 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 VPS28Q9UK41 221 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 VANGL2Q9ULK5 521 aa19.46■□□□□ 0.71
HMGCS1-206ENST00000511774 K7ELQ4 463 aaPredicted RBP19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 CETN3O15182 167 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 HGFP14210 728 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 JUNDP17535 347 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 NDUFA8P51970 172 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 PMS1P54277 932 aaKnown RBP19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 AUHQ13825 339 aaKnown RBP19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 ARSIQ5FYB1 569 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 RABGAP1LQ5R372 815 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 TTC39BQ5VTQ0 682 aaPredicted RBP19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 DCP2Q8IU60 420 aaKnown RBP19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 SGF29Q96ES7 293 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 RPRD1AQ96P16 312 aaPredicted RBP19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 SLC4A5Q9BY07 1137 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 HDAC8Q9BY41 377 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 SLC17A9Q9BYT1 436 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 ANKMY1Q9P2S6 941 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 RABGEF1Q9UJ41 708 aa19.45■□□□□ 0.7
HMGCS1-206ENST00000511774 SYNJ2BP-COX16A0A087WUM0 186 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 E5RJQ4 531 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 NTN3O00634 580 aaPredicted RBP19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 CNTN5O94779 1100 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 MLLT3P42568 568 aaPredicted RBP19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 C1orf61Q13536 156 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 PDE1CQ14123 709 aaPredicted RBP19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 STILQ15468 1287 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 LINGO4Q6UY18 593 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 USP53Q70EK8 1073 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 ARHGEF19Q8IW93 802 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 TPCN2Q8NHX9 752 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 LMO3Q8TAP4 145 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 CCDC3Q9BQI4 270 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 TNKS2Q9H2K2 1166 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 POPDC2Q9HBU9 364 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 COX16Q9P0S2 106 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 VPS51Q9UID3 782 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 TBC1D30Q9Y2I9 924 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 WASF2Q9Y6W5 498 aa19.44■□□□□ 0.7
HMGCS1-206ENST00000511774 ZFC3H1O60293 1989 aaKnown RBP19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 ZNF821O75541 412 aaPredicted RBP19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 CELA2BP08218 269 aaPredicted RBP19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 UGT1A5P35504 534 aa19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 OXCT1P55809 520 aa19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 YWHAZP63104 245 aaKnown RBP19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 ZNF574Q6ZN55 896 aaPredicted RBP19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 PPM1KQ8N3J5 372 aa19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 ATP11CQ8NB49 1132 aa19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 LIN37Q96GY3 246 aaPredicted RBP19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 PPP1R13BQ96KQ4 1090 aa19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 CLPBQ9H078 707 aa19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 SYNDIG1Q9H7V2 258 aa19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 FADS3Q9Y5Q0 445 aa19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 HS3ST4Q9Y661 456 aa19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 SPENQ96T58 3664 aaKnown RBP19.43■□□□□ 0.7
HMGCS1-206ENST00000511774 I6L893 689 aaPredicted RBP19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 TPP1O14773 563 aa19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 PLD2O14939 933 aa19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 SLC16A3O15427 465 aaKnown RBP19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 SART1O43290 800 aaKnown RBP19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 LEFTY1O75610 366 aa19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 ENDOD1O94919 500 aa19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 GJB6O95452 261 aa19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 SYKP43405 635 aa19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 FMO5P49326 533 aa19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 CYP4F2P78329 520 aa19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 ALFQ53S48 1182 aa19.42■□□□□ 0.7
HMGCS1-206ENST00000511774 DPY19L3Q6ZPD9 716 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms