RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 TBC1D3HP0C7X1 549 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 HOXB3P14651 431 aaPredicted RBP12.31□□□□□ -0.44
CHFR-208ENST00000511001 RHOQP17081 205 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 CHRNA3P32297 505 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 CLCN6P51797 869 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 OGDHQ02218 1023 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 SCAPQ12770 1279 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 TRIP6Q15654 476 aaKnown RBP12.31□□□□□ -0.44
CHFR-208ENST00000511001 ARL13BQ3SXY8 428 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 PIP5KL1Q5T9C9 394 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 TBC1D3GQ6DHY5 549 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 TBC1D3CQ6IPX1 549 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 DNAJC24Q6P3W2 148 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 LRSAM1Q6UWE0 723 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 GLRX5Q86SX6 157 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 TBC1D3Q8IZP1 549 aaPredicted RBP12.31□□□□□ -0.44
CHFR-208ENST00000511001 PYROXD2Q8N2H3 581 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 SPON2Q9BUD6 331 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 SCNM1Q9BWG6 230 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 TTYH3Q9C0H2 523 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 TNKS2Q9H2K2 1166 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 ATP13A1Q9HD20 1204 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 TMEM248Q9NWD8 314 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 BTBD3Q9Y2F9 522 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 COL5A1P20908 1838 aaPredicted RBP12.31□□□□□ -0.44
CHFR-208ENST00000511001 LRRK1Q38SD2 2015 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 GOLGA4Q13439 2230 aaKnown RBP12.31□□□□□ -0.44
CHFR-208ENST00000511001 AKAP13Q12802 2813 aa12.31□□□□□ -0.44
CHFR-208ENST00000511001 A0A1B0GTQ1 180 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 LRRC53A6NM62 1247 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 C1QTNF9BB2RNN3 333 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 CBX4O00257 560 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 C1QTNF9P0C862 333 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 TNFAIP3P21580 790 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 CD38P28907 300 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 MAPKAPK2P49137 400 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 SERPINH1P50454 418 aaKnown RBP12.3□□□□□ -0.44
CHFR-208ENST00000511001 ZNF143P52747 638 aaPredicted RBP12.3□□□□□ -0.44
CHFR-208ENST00000511001 SLC20A2Q08357 652 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 SHBQ15464 509 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 NFKBIBQ15653 356 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 RWDD4Q6NW29 188 aaKnown RBP12.3□□□□□ -0.44
CHFR-208ENST00000511001 DPY19L3Q6ZPD9 716 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 RAB44Q7Z6P3 723 aaPredicted RBP12.3□□□□□ -0.44
CHFR-208ENST00000511001 ADAT2Q7Z6V5 191 aaKnown RBP12.3□□□□□ -0.44
CHFR-208ENST00000511001 SLCO6A1Q86UG4 719 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 TRIM69Q86WT6 500 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 DNAAF5Q86Y56 855 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 TMIEQ8NEW7 156 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 GATA6Q92908 595 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 ARHGEF2Q92974 986 aaKnown RBP12.3□□□□□ -0.44
CHFR-208ENST00000511001 VOPP1Q96AW1 172 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 TBC1D31Q96DN5 1066 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 MCEEQ96PE7 176 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 RETREG1Q9H6L5 497 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 NOL6Q9H6R4 1146 aaKnown RBP12.3□□□□□ -0.44
CHFR-208ENST00000511001 DNAI1Q9UI46 699 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 TPX2Q9ULW0 747 aaKnown RBP12.3□□□□□ -0.44
CHFR-208ENST00000511001 WASF2Q9Y6W5 498 aa12.3□□□□□ -0.44
CHFR-208ENST00000511001 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 FLRT2O43155 660 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 PCDHGA12O60330 932 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 LEFTY1O75610 366 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 CCDC172P0C7W6 258 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 FTH1P19P0C7X4 201 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 MAT2AP31153 395 aaKnown RBP12.29□□□□□ -0.44
CHFR-208ENST00000511001 L1CAMP32004 1257 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 PRKCIP41743 596 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 CCT8P50990 548 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 NR1I3Q14994 352 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 FILIP1LQ4L180 1135 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 ARSIQ5FYB1 569 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 PRAMEF14Q5SWL7 426 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 NAPEPLDQ6IQ20 393 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 RETSATQ6NUM9 610 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 UNQ6494/PRO21346Q6UXR6 183 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 ZNF571Q7Z3V5 609 aaPredicted RBP12.29□□□□□ -0.44
CHFR-208ENST00000511001 SLFN11Q7Z7L1 901 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 PRPF39Q86UA1 669 aaKnown RBP12.29□□□□□ -0.44
CHFR-208ENST00000511001 CHCHD4Q8N4Q1 142 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 PCDH20Q8N6Y1 951 aaKnown RBP12.29□□□□□ -0.44
CHFR-208ENST00000511001 SETD7Q8WTS6 366 aaKnown RBP12.29□□□□□ -0.44
CHFR-208ENST00000511001 VCPIP1Q96JH7 1222 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 SERAC1Q96JX3 654 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 CCDC114Q96M63 670 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 CNPY3Q9BT09 278 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 CEP44Q9C0F1 390 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 MAGEH1Q9H213 219 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 HAUS4Q9H6D7 363 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 CBX8Q9HC52 389 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 PREBQ9HCU5 417 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 AASDHPPTQ9NRN7 309 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 TOR4AQ9NXH8 423 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 AIPL1Q9NZN9 384 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 KLK13Q9UKR3 277 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 ZMIZ1Q9ULJ6 1067 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 FZD10Q9ULW2 581 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 FCF1Q9Y324 198 aaKnown RBP12.29□□□□□ -0.44
CHFR-208ENST00000511001 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
CHFR-208ENST00000511001 NEUROG3Q9Y4Z2 214 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms