RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 LRP4O75096 1905 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 MCF2LO15068 1137 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 RAD1O60671 282 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 LUC7L3O95232 432 aaKnown RBP11.06□□□□□ -0.64
SNF8-207ENST00000509995 IGLV3-27P01718 113 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 CELA2BP08218 269 aaPredicted RBP11.06□□□□□ -0.64
SNF8-207ENST00000509995 P4HA1P13674 534 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 SLC11A2P49281 568 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 NUMBP49757 651 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 COPB1P53618 953 aaKnown RBP11.06□□□□□ -0.64
SNF8-207ENST00000509995 CCDC15Q0P6D6 951 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 BIRC3Q13489 604 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 NCOA4Q13772 614 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 EFHC2Q5JST6 749 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 RAB41Q5JT25 222 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 NADSYN1Q6IA69 706 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 BHLHA9Q7RTU4 235 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 TTC13Q8NBP0 860 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 OR6C4Q8NGE1 309 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 RNF139Q8WU17 664 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 DNAJC19Q96DA6 116 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 C5orf34Q96MH7 638 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 TAAR9Q96RI9 348 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 HAPLN3Q96S86 360 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 SLC17A9Q9BYT1 436 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 SLC13A1Q9BZW2 595 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 SEMA6CQ9H3T2 930 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 KCNMB2Q9Y691 235 aa11.06□□□□□ -0.64
SNF8-207ENST00000509995 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
SNF8-207ENST00000509995 ACSL4O60488 711 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 SORBS2O94875 1100 aaKnown RBP11.05□□□□□ -0.64
SNF8-207ENST00000509995 PAK4O96013 591 aaPredicted RBP11.05□□□□□ -0.64
SNF8-207ENST00000509995 PDGFAP04085 211 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 ZNF18P17022 549 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 ASPAP45381 313 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 INCA1Q0VD86 236 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 PTK2BQ14289 1009 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 ARHGAP44Q17R89 818 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 CRTC2Q53ET0 693 aaPredicted RBP11.05□□□□□ -0.64
SNF8-207ENST00000509995 RILPL1Q5EBL4 403 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 ATP1A1-AS1Q5TC04 95 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 Q6ZVU0 165 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 SPRED1Q7Z699 444 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 CFAP52Q8N1V2 620 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 Q8N9G6 341 aaPredicted RBP11.05□□□□□ -0.64
SNF8-207ENST00000509995 SCG3Q8WXD2 468 aaKnown RBP11.05□□□□□ -0.64
SNF8-207ENST00000509995 STARD8Q92502 1023 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 EDEM1Q92611 657 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 KIAA1143Q96AT1 154 aaPredicted RBP11.05□□□□□ -0.64
SNF8-207ENST00000509995 EFHD1Q9BUP0 239 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 SLC29A3Q9BZD2 475 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 APPL1Q9UKG1 709 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 DOLKQ9UPQ8 538 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 SLC5A6Q9Y289 635 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 B3GALT1Q9Y5Z6 326 aa11.05□□□□□ -0.64
SNF8-207ENST00000509995 FRMD3A2A2Y4 597 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 KPNA3O00505 521 aaPredicted RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 FPGTO14772 594 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 ATP9BO43861 1147 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 ZBED1O96006 694 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 CTSLP07711 333 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 FGF3P11487 239 aaPredicted RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 HOXB4P17483 251 aaPredicted RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 CASP4P49662 377 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 VASPP50552 380 aaPredicted RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 TKTL1P51854 596 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 PFN3P60673 137 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 RPS21P63220 83 aaKnown RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 MC1RQ01726 317 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 SULT2A1Q06520 285 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 MAP9Q49MG5 647 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 ACCSLQ4AC99 568 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 PPP1R26Q5T8A7 1209 aaPredicted RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 PM20D1Q6GTS8 502 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 KIAA1161Q6NSJ0 714 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 LVRNQ6Q4G3 990 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 PIGZQ86VD9 579 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 UNC45BQ8IWX7 931 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 MMP21Q8N119 569 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 FSTL5Q8N475 847 aaPredicted RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 NANOS1Q8WY41 292 aaKnown RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 NDRG1Q92597 394 aaKnown RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 KLF6Q99612 283 aaPredicted RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 DDA1Q9BW61 102 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 NT5C1AQ9BXI3 368 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 INTS2Q9H0H0 1204 aaKnown RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 NUCKS1Q9H1E3 243 aaKnown RBP11.04□□□□□ -0.64
SNF8-207ENST00000509995 DYRK4Q9NR20 520 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 ITGB1BP2Q9UKP3 347 aa11.04□□□□□ -0.64
SNF8-207ENST00000509995 LOC101059948A0A1B0GTJ6 334 aa11.03□□□□□ -0.64
SNF8-207ENST00000509995 M0QYT0 321 aa11.03□□□□□ -0.64
SNF8-207ENST00000509995 HGSO14964 777 aaPredicted RBP11.03□□□□□ -0.64
SNF8-207ENST00000509995 RFPL1O75677 317 aa11.03□□□□□ -0.64
SNF8-207ENST00000509995 VNN1O95497 513 aa11.03□□□□□ -0.64
SNF8-207ENST00000509995 IDEP14735 1019 aa11.03□□□□□ -0.64
SNF8-207ENST00000509995 TCN2P20062 427 aa11.03□□□□□ -0.64
SNF8-207ENST00000509995 LEPRP48357 1165 aaKnown RBP11.03□□□□□ -0.64
SNF8-207ENST00000509995 THOP1P52888 689 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms