RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 EGFL8Q99944 293 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TLR10Q9BXR5 811 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SFXN1Q9H9B4 322 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 MBNL1Q9NR56 388 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 CWC15Q9P013 229 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 CEP72Q9P209 647 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 POGKQ9P215 609 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 UBA2Q9UBT2 640 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 EIF2B4Q9UI10 523 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ANAPC2Q9UJX6 822 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SLC12A4Q9UP95 1085 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 LIPT1Q9Y234 373 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SSX2IPQ9Y2D8 614 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 PCDHA10Q9Y5I2 948 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 COPG1Q9Y678 874 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TMEM94Q12767 1356 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TMEM2Q9UHN6 1383 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 UTYO14607 1347 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 A0A1W2PQ09 198 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 GAGE12BA1L429 117 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 GAGE12HA6NDE8 117 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 OTOL1A6NHN0 477 aaPredicted RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 LRRC53A6NM62 1247 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 KCNJ18B7U540 433 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ZNF213O14771 459 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CYP27B1O15528 508 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 KIF1CO43896 1103 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 VPS4BO75351 444 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ENTPD3O75355 529 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 STC2O76061 302 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 HLA-DQA2P01906 255 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 MYBL1P10243 752 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ACTN1P12814 892 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ZNF37AP17032 561 aaPredicted RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 HOXA5P20719 270 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 TCEA1P23193 301 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 PBX1P40424 430 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 SLURP1P55000 103 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 FOXL2P58012 376 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 EFNB1P98172 346 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 TFAP4Q01664 338 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CSTF3Q12996 717 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 PDCLQ13371 301 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 TUBB3Q13509 450 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 KRTCAP3Q53RY4 240 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 PET117Q6UWS5 81 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 MFSD6Q6ZSS7 791 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 SCML4Q8N228 414 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ARL6IP6Q8N6S5 226 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 RUFY2Q8WXA3 655 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ANP32BQ92688 251 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 RMDN1Q96DB5 314 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ZNF764Q96H86 408 aaPredicted RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 DPYSL5Q9BPU6 564 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 SLC25A23Q9BV35 468 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 APOL6Q9BWW8 343 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 GRPEL1Q9HAV7 217 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ASAH2Q9NR71 780 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 DLGAP2Q9P1A6 1054 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CPSF2Q9P2I0 782 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 IL17BQ9UHF5 180 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CORO1CQ9ULV4 474 aaPredicted RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 GABRQQ9UN88 632 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 PA2G4Q9UQ80 394 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CCNB3Q8WWL7 1395 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 PTCH1Q13635 1447 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 SETD5Q9C0A6 1442 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 TEX13CA0A0J9YWL9 993 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 A0A1B0GTW7 788 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 AGPSO00116 658 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 HCRTR2O43614 444 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 TMPRSS11DO60235 418 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 SYNCRIPO60506 623 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 B4GALT4O60513 344 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 RECQL5O94762 991 aaPredicted RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 PDE8BO95263 885 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 THEGLP0DJG4 465 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 P4HA1P13674 534 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 HLA-DPA1P20036 260 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 IL10P22301 178 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 IGHMBP2P38935 993 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 GP5P40197 560 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 GARSP41250 739 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 LIG4P49917 911 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CHN2P52757 468 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 MRPL12P52815 198 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ARHGAP8P85298 464 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CSRP2Q16527 193 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 P3H1Q32P28 736 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 TWISTNBQ3B726 338 aaPredicted RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 NT5DC1Q5TFE4 455 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 MEX3CQ5U5Q3 659 aaKnown RBP2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CST9LP1Q5W188 147 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 DCLRE1AQ6PJP8 1040 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 ABRAXAS1Q6UWZ7 409 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CHST9Q7L1S5 443 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 CCDC91Q7Z6B0 441 aa2.36□□□□□ -2.03
PDE4D-218ENST00000509368 LURAP1LQ8IV03 231 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms