RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 IL22Q9GZX6 179 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 MYLK2Q9H1R3 596 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 SAGE1Q9NXZ1 904 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 AAR2Q9Y312 384 aaKnown RBP15.12■□□□□ 0.01
PHF3-209ENST00000509330 STARD13Q9Y3M8 1113 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 COCHO43405 550 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 USP1O94782 785 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 TACR2P21452 398 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 ATP5C1P36542 298 aaKnown RBP15.12■□□□□ 0.01
PHF3-209ENST00000509330 GP5P40197 560 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 WNT3AP56704 352 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 MPP1Q00013 466 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 BST1Q10588 318 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 ZNF460Q14592 562 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 TEDDM1Q5T9Z0 273 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 PACS2Q86VP3 889 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 PLD6Q8N2A8 252 aaKnown RBP15.12■□□□□ 0.01
PHF3-209ENST00000509330 SPATA6LQ8N4H0 392 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 PPP1R14CQ8TAE6 165 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 MTBPQ96DY7 904 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 C1orf74Q96LT6 269 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 FCRL5Q96RD9 977 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 KDM4CQ9H3R0 1056 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 SNX15Q9NRS6 342 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 SLC39A10Q9ULF5 831 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 FNDC1Q4ZHG4 1894 aaPredicted RBP15.12■□□□□ 0.01
PHF3-209ENST00000509330 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.12■□□□□ 0.01
PHF3-209ENST00000509330 PRRG1O14668 218 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 LYPLA1O75608 230 aaPredicted RBP15.12■□□□□ 0.01
PHF3-209ENST00000509330 DHRS4L1P0CG22 281 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 MPP3Q13368 585 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 LRRC26Q2I0M4 334 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 FYB2Q5VWT5 728 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 DENND5AQ6IQ26 1287 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 SLC8B1Q6J4K2 584 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 TIGD7Q6NT04 549 aaPredicted RBP15.12■□□□□ 0.01
PHF3-209ENST00000509330 CCNJLQ8IV13 435 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 C20orf27Q9GZN8 174 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 RNF38Q9H0F5 515 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 ECT2Q9H8V3 914 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 CHKBQ9Y259 395 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 ZFP37Q9Y6Q3 630 aaPredicted RBP15.12■□□□□ 0.01
PHF3-209ENST00000509330 NUMBLQ9Y6R0 609 aa15.12■□□□□ 0.01
PHF3-209ENST00000509330 FAM237BA0A1B0GVD1 139 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 ERI2A8K979 691 aaKnown RBP15.11■□□□□ 0.01
PHF3-209ENST00000509330 F5H5T6 163 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 PHGDHO43175 533 aaKnown RBP15.11■□□□□ 0.01
PHF3-209ENST00000509330 ANXA9O76027 345 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 PEX11BO96011 259 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 SLC4A1P02730 911 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 SPATA17Q96L03 361 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 OLA1Q9NTK5 396 aaKnown RBP15.11■□□□□ 0.01
PHF3-209ENST00000509330 TMEM248Q9NWD8 314 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 TMEM216Q9P0N5 145 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 TBX21Q9UL17 535 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 SOX13Q9UN79 622 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 ATXN2Q99700 1313 aaKnown RBP15.11■□□□□ 0.01
PHF3-209ENST00000509330 UNC80Q8N2C7 3258 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 ZBBXA8MT70 800 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 TARSP26639 723 aaKnown RBP15.11■□□□□ 0.01
PHF3-209ENST00000509330 IL31Q6EBC2 164 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 RAPH1Q70E73 1250 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 PGBD5Q8N414 524 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 C10orf82Q8WW14 230 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 E2F7Q96AV8 911 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 PRR11Q96HE9 360 aaPredicted RBP15.11■□□□□ 0.01
PHF3-209ENST00000509330 TMEM237Q96Q45 408 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 CPSF2Q9P2I0 782 aaKnown RBP15.11■□□□□ 0.01
PHF3-209ENST00000509330 EMCNQ9ULC0 261 aa15.11■□□□□ 0.01
PHF3-209ENST00000509330 ZNF840PA6NDX5 716 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 MUSKO15146 869 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 KLKB1P03952 638 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 CLTBP09497 229 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 CCNFP41002 786 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 NPY2RP49146 381 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 PSEN1P49768 467 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 TWF1Q12792 350 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 PTPRCAPQ14761 206 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 AFMIDQ63HM1 303 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 CNKSR3Q6P9H4 555 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 LDB1Q86U70 411 aaPredicted RBP15.1■□□□□ 0.01
PHF3-209ENST00000509330 UMODL1-AS1Q8N2C9 162 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 RBBP8Q99708 897 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 FBXO6Q9NRD1 293 aaPredicted RBP15.1■□□□□ 0.01
PHF3-209ENST00000509330 DNMT3LQ9UJW3 386 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 YIPF1Q9Y548 306 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 COL4A4P53420 1690 aaPredicted RBP15.1■□□□□ 0.01
PHF3-209ENST00000509330 AURKAO14965 403 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 FSBPO95073 299 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 CORO1AP31146 461 aaKnown RBP15.1■□□□□ 0.01
PHF3-209ENST00000509330 ALDH1A3P47895 512 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 GLRBP48167 497 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 GEMP55040 296 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 CBLBQ13191 982 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 GRM3Q14832 879 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 FASTKD1Q53R41 847 aaKnown RBP15.1■□□□□ 0.01
PHF3-209ENST00000509330 RGS9BPQ6ZS82 235 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 NLRP9Q7RTR0 991 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 LINC00523Q86TU6 105 aa15.1■□□□□ 0.01
PHF3-209ENST00000509330 MTDHQ86UE4 582 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms