RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 NEU3Q9UQ49 428 aa15.13■□□□□ 0.01
UBE2D3-228ENST00000508974 SPEGQ15772 3267 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 AKAP13Q12802 2813 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 GOLGA8CPA6NN73 597 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 PLRG1O43660 514 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 CREB3O43889 395 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 ZMPSTE24O75844 475 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 SKILP12757 684 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 RHOQP17081 205 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 CTSKP43235 329 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 RECQLP46063 649 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 SERPINH1P50454 418 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 CCR5P51681 352 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 ZNF143P52747 638 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 SHC2P98077 582 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 OGDHQ02218 1023 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 KLHL40Q2TBA0 621 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 ARSIQ5FYB1 569 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 EFHC2Q5JST6 749 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 PPP1R15BQ5SWA1 713 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 RETSATQ6NUM9 610 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 ZNF783Q6ZMS7 281 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 DPY19L3Q6ZPD9 716 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 NLRP14Q86W24 1093 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 RYBPQ8N488 228 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 PNPLA1Q8N8W4 532 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 OR6K2Q8NGY2 324 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 KLK6Q92876 244 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 SYT11Q9BT88 431 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 SCNM1Q9BWG6 230 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 TM6SF2Q9BZW4 377 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 DYRK4Q9NR20 520 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 TMEM248Q9NWD8 314 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 GPATCH2LQ9NWQ4 482 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 MYO6Q9UM54 1294 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 BTBD3Q9Y2F9 522 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 MAP1BP46821 2468 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 KNL1Q8NG31 2342 aa15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 TPRP12270 2363 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-228ENST00000508974 A0A1W2PQC6 194 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 LEFTY1O75610 366 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 CD38P28907 300 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 EPHB2P29323 1055 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 GKP32189 559 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 MAPKAPK2P49137 400 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 TAS2R38P59533 333 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 TPM4P67936 248 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 NRG1Q02297 640 aaPredicted RBP15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 PIP5KL1Q5T9C9 394 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 ZNF571Q7Z3V5 609 aaPredicted RBP15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 TMC6Q7Z403 805 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 NETO2Q8NC67 525 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 RHBDD1Q8TEB9 315 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 ARHGEF2Q92974 986 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 NTAN1Q96AB6 310 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 CNPY3Q9BT09 278 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 ZDHHC6Q9H6R6 413 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 PCOLCE2Q9UKZ9 415 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 CA5BQ9Y2D0 317 aa15.11■□□□□ 0.01
UBE2D3-228ENST00000508974 C1QTNF9BB2RNN3 333 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 VILLO15195 856 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 SLC7A4O43246 635 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 RAMP2O60895 175 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 RNGTTO60942 597 aaKnown RBP15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 ZNF821O75541 412 aaPredicted RBP15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 PRNPP04156 253 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 C1QTNF9P0C862 333 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 ZNF883P0CG24 379 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 PRLRP16471 622 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 PSMA2P25787 234 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 CCT8P50990 548 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 CCNHP51946 323 aaPredicted RBP15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 FANCCQ00597 558 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 KLHL30Q0D2K2 578 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 NR1I3Q14994 352 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 POLD3Q15054 466 aaPredicted RBP15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 NAPEPLDQ6IQ20 393 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 PRPF39Q86UA1 669 aaKnown RBP15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 GATAD2AQ86YP4 633 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 CHCHD4Q8N4Q1 142 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 CPLX3Q8WVH0 158 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 FAM131CQ96AQ9 280 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 TRIM7Q9C029 511 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 ARHGAP20Q9P2F6 1191 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 MYO1AQ9UBC5 1043 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 KLK13Q9UKR3 277 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 FZD10Q9ULW2 581 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 HPCAL4Q9UM19 191 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 WASF3Q9UPY6 502 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 WASF2Q9Y6W5 498 aa15.1■□□□□ 0.01
UBE2D3-228ENST00000508974 ASPMQ8IZT6 3477 aa15.09■□□□□ 0.01
UBE2D3-228ENST00000508974 A0A1W2PQU0 124 aa15.09■□□□□ 0.01
UBE2D3-228ENST00000508974 A0A1W2PR77 199 aa15.09■□□□□ 0.01
UBE2D3-228ENST00000508974 DDX3XO00571 662 aaKnown RBP eCLIP15.09■□□□□ 0.012e-17■■■■□ 23.8
UBE2D3-228ENST00000508974 FLRT2O43155 660 aa15.09■□□□□ 0.01
UBE2D3-228ENST00000508974 LATO43561 262 aa15.09■□□□□ 0.01
UBE2D3-228ENST00000508974 CBFA2T3O75081 653 aa15.09■□□□□ 0.01
UBE2D3-228ENST00000508974 PCDH8O95206 1070 aa15.09■□□□□ 0.01
UBE2D3-228ENST00000508974 CD160O95971 181 aa15.09■□□□□ 0.01
UBE2D3-228ENST00000508974 FTLP02792 175 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms