RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 POLQO75417 2590 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 CCDC187A0A096LP49 1063 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 SPTY2D1-AS1A0A0U1RR47 76 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 CPED1A4D0V7 1026 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 H3BM21 787 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 RNF225M0QZC1 329 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 EFSO43281 561 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 TNFSF15O95150 251 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 TRUB2O95900 331 aaKnown RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 F13A1P00488 732 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 ITGB2P05107 769 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 PRR29P0C7W0 189 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 ZSCAN22P10073 491 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 SLC2A3P11169 496 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 BRD2P25440 801 aaKnown RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 CHRNA3P32297 505 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 GPD2P43304 727 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 ACADSBP45954 432 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 NUMBP49757 651 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 FZD2Q14332 565 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 ZSCAN23Q3MJ62 389 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 FOXD4L6Q3SYB3 417 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 ZNF542PQ5EBM4 170 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 DCAF17Q5H9S7 520 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 FOXD4L3Q6VB84 417 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 EFL1Q7Z2Z2 1120 aaKnown RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 PARGQ86W56 976 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 CIR1Q86X95 450 aaPredicted RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 OR52K2Q8NGK3 314 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 RNF34Q969K3 372 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 ARRDC3Q96B67 414 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 CCDC114Q96M63 670 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 SEMA3CQ99985 751 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 POPDC2Q9HBU9 364 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 DYRK4Q9NR20 520 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.62□□□□□ -0.87
NEDD9-211ENST00000508546 ACSL6Q9UKU0 697 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 PCDHB4Q9Y5E5 795 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 CHD5Q8TDI0 1954 aa9.62□□□□□ -0.87
NEDD9-211ENST00000508546 FAM237AA0A1B0GTK4 181 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 PMS2P1A4D2B8 440 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 POM121BA6NF01 834 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 KPNA3O00505 521 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-211ENST00000508546 PMM2O15305 246 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 SLC16A3O15427 465 aaKnown RBP9.61□□□□□ -0.87
NEDD9-211ENST00000508546 AQP9O43315 295 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 BNIP3LO60238 219 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 PCDH8O95206 1070 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 PRNPP04156 253 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 FAM87AP0C7U9 286 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 SFTPCP11686 197 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 SRCP12931 536 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 SYKP43405 635 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 RABIFP47224 123 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 PDX1P52945 283 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 INHBCP55103 352 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 RPS21P63220 83 aaKnown RBP9.61□□□□□ -0.87
NEDD9-211ENST00000508546 LRMPQ12912 555 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 MTA1Q13330 715 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 NR0B2Q15466 257 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 MEA1Q16626 185 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 FOXD4L5Q5VV16 416 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-211ENST00000508546 SEL1L3Q68CR1 1132 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 OR6B2Q6IFH4 312 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 KIAA1161Q6NSJ0 714 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 FBXL22Q6P050 247 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 ERN2Q76MJ5 926 aaKnown RBP9.61□□□□□ -0.87
NEDD9-211ENST00000508546 PTAR1Q7Z6K3 402 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-211ENST00000508546 ZSCAN30Q86W11 494 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 FAM26EQ8N5C1 309 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 OR2A12Q8NGT7 310 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 STK32AQ8WU08 396 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 FOXD4L4Q8WXT5 416 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-211ENST00000508546 NAT6Q93015 286 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 SLC35C1Q96A29 364 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 SGF29Q96ES7 293 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 LIN37Q96GY3 246 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-211ENST00000508546 NT5C1BQ96P26 610 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 IL12RB2Q99665 862 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 BOCQ9BWV1 1114 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 SLC4A5Q9BY07 1137 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 HDAC8Q9BY41 377 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 EPN3Q9H201 632 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 THAP9Q9H5L6 903 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 ST7Q9NRC1 585 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 KLF15Q9UIH9 416 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 VPS28Q9UK41 221 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 TBC1D30Q9Y2I9 924 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 PCDHGA7Q9Y5G6 932 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 LRRK1Q38SD2 2015 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 CSMD1Q96PZ7 3565 aa9.61□□□□□ -0.87
NEDD9-211ENST00000508546 ARHGEF17Q96PE2 2063 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 LRP4O75096 1905 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 CENPEQ02224 2701 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 NTN3O00634 580 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 NOBOXO60393 691 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 CLDN11O75508 207 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 GJB6O95452 261 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 MT-CO1P00395 513 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms