RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MRGPRX3Q96LB0 322 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 OLFM3Q96PB7 478 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 CACNA2D2Q9NY47 1150 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 J3KR12 359 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 IGSF6O95976 241 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 CES1P23141 567 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 GLDCP23378 1020 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 DEKP35659 375 aaKnown RBP20.44■□□□□ 0.86
USP53-203ENST00000507597 CXCL12P48061 93 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 NUBP1P53384 320 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 RHOAP61586 193 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 SLC10A2Q12908 348 aaPredicted RBP20.44■□□□□ 0.86
USP53-203ENST00000507597 KLF1Q13351 362 aaPredicted RBP20.44■□□□□ 0.86
USP53-203ENST00000507597 GRM3Q14832 879 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 TMEM31Q5JXX7 168 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 AADACL2Q6P093 401 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 NPNTQ6UXI9 565 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 LINGO4Q6UY18 593 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 SFTPA1Q8IWL2 248 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 CCDC33Q8N5R6 958 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 CAMKK1Q8N5S9 505 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 VAT1Q99536 393 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 PDFQ9HBH1 243 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 SLCO3A1Q9UIG8 710 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 MIA3Q5JRA6 1907 aa20.44■□□□□ 0.86
USP53-203ENST00000507597 CFAP69A5D8W1 941 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 ALOX15BO15296 676 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 TMCC1O94876 653 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 GSRP00390 522 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 PDGFBP01127 241 aaPredicted RBP20.43■□□□□ 0.86
USP53-203ENST00000507597 RBP3P10745 1247 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 CCNB1P14635 433 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 MAPK8P45983 427 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 STK19P49842 368 aaPredicted RBP20.43■□□□□ 0.86
USP53-203ENST00000507597 NSUN2Q08J23 767 aaKnown RBP eCLIP20.43■□□□□ 0.86
USP53-203ENST00000507597 TUBB2AQ13885 445 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 SLC45A4Q5BKX6 768 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 C22orf39Q6P5X5 142 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 DARS2Q6PI48 645 aaKnown RBP20.43■□□□□ 0.86
USP53-203ENST00000507597 ZC3H18Q86VM9 953 aaKnown RBP20.43■□□□□ 0.86
USP53-203ENST00000507597 OR8D1Q8WZ84 308 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 TUBB2BQ9BVA1 445 aa20.43■□□□□ 0.86
USP53-203ENST00000507597 SPATA6Q9NWH7 488 aaPredicted RBP20.43■□□□□ 0.86
USP53-203ENST00000507597 TTC34A8MYJ7 566 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 LAMTOR5O43504 91 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 MAP3K6O95382 1288 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 MT-CO1P00395 513 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 PECAM1P16284 738 aaPredicted RBP20.42■□□□□ 0.86
USP53-203ENST00000507597 STIP1P31948 543 aaKnown RBP20.42■□□□□ 0.86
USP53-203ENST00000507597 WASP42768 502 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 MMP13P45452 471 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 NUMBP49757 651 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 LMNB2Q03252 620 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 ADCY2Q08462 1091 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 CCDC15Q0P6D6 951 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 ELAVL3Q14576 367 aaKnown RBP20.42■□□□□ 0.86
USP53-203ENST00000507597 CRY1Q16526 586 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 CCNG2Q16589 344 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 CARD16Q5EG05 197 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 RALGPS1Q5JS13 557 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 Q6ZS52 159 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 MAML1Q92585 1016 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 MYO19Q96H55 970 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 GDAP1L1Q96MZ0 367 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 ACOX2Q99424 681 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 LGMNQ99538 433 aa20.42■□□□□ 0.86
USP53-203ENST00000507597 SAE1Q9UBE0 346 aaPredicted RBP20.42■□□□□ 0.86
USP53-203ENST00000507597 FEZ2Q9UHY8 353 aaPredicted RBP20.42■□□□□ 0.86
USP53-203ENST00000507597 BCLAF3A2AJT9 711 aaKnown RBP20.41■□□□□ 0.86
USP53-203ENST00000507597 SGK1O00141 431 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 POP4O95707 220 aaKnown RBP20.41■□□□□ 0.86
USP53-203ENST00000507597 ACTN2P35609 894 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 CAMK2GQ13555 558 aaPredicted RBP20.41■□□□□ 0.86
USP53-203ENST00000507597 FAM46CQ5VWP2 391 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 ARHGAP36Q6ZRI8 547 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 TP53INP2Q8IXH6 220 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 RYBPQ8N488 228 aaPredicted RBP20.41■□□□□ 0.86
USP53-203ENST00000507597 TEX26Q8N6G2 289 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 NETO2Q8NC67 525 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 TSTD1Q8NFU3 115 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 OR2AP1Q8NGE2 309 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 OR2T3Q8NH03 318 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 KIF18AQ8NI77 898 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 HTR3CQ8WXA8 447 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 LRIG1Q96JA1 1093 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 QKIQ96PU8 341 aaKnown RBP eCLIP20.41■□□□□ 0.86
USP53-203ENST00000507597 PSKH2Q96QS6 385 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 RBM22Q9NW64 420 aaKnown RBP eCLIP20.41■□□□□ 0.86
USP53-203ENST00000507597 SEPT10Q9P0V9 454 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 DLGAP2Q9P1A6 1054 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 TRHDEQ9UKU6 1024 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 SCML1Q9UN30 329 aa20.41■□□□□ 0.86
USP53-203ENST00000507597 FCF1Q9Y324 198 aaKnown RBP20.41■□□□□ 0.86
USP53-203ENST00000507597 C1QTNF3-AMACRE9PGA6 284 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 PI15O43692 258 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 BNIP3LO60238 219 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 PAPSS2O95340 614 aaPredicted RBP20.4■□□□□ 0.86
USP53-203ENST00000507597 PRNPP04156 253 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 PRKCHP24723 683 aa20.4■□□□□ 0.86
USP53-203ENST00000507597 AVPR2P30518 371 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms