RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 METTL5Q9NRN9 209 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-204ENST00000507293 SAMSN1Q9NSI8 373 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-204ENST00000507293 TAB2Q9NYJ8 693 aa11.8□□□□□ -0.52
HMGCS1-204ENST00000507293 CHMP5Q9NZZ3 219 aa11.8□□□□□ -0.52
HMGCS1-204ENST00000507293 ZNF212Q9UDV6 495 aa11.8□□□□□ -0.52
HMGCS1-204ENST00000507293 IL36AQ9UHA7 158 aa11.8□□□□□ -0.52
HMGCS1-204ENST00000507293 TMEM59LQ9UK28 342 aa11.8□□□□□ -0.52
HMGCS1-204ENST00000507293 WDFY3Q8IZQ1 3526 aa11.8□□□□□ -0.52
HMGCS1-204ENST00000507293 ILVBLA1L0T0 632 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 PCDH8O95206 1070 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 CKMT2P17540 419 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 HNRNPA2B1P22626 353 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 AKT2P31751 481 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 SERPINH1P50454 418 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 CCDC15Q0P6D6 951 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 TARDBPQ13148 414 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 PROX2Q3B8N5 592 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 TCP11X2Q5H9J9 407 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 ACBD5Q5T8D3 534 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 SEL1L3Q68CR1 1132 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 RETSATQ6NUM9 610 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 NEK5Q6P3R8 708 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 ZNF783Q6ZMS7 281 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 DPY19L3Q6ZPD9 716 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 ERN2Q76MJ5 926 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 DRC7Q8IY82 874 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 EMC1Q8N766 993 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 SLC20A1Q8WUM9 679 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 HAPLN3Q96S86 360 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 STK33Q9BYT3 514 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 ZYG11BQ9C0D3 744 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 TMEM51Q9NW97 253 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 ZFR2Q9UPR6 939 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 WASF2Q9Y6W5 498 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 DMXL2Q8TDJ6 3036 aa11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 URB1O60287 2271 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-204ENST00000507293 TRIM38O00635 465 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 SIGLEC6O43699 453 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 ZNF821O75541 412 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 LEFTY1O75610 366 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 ZMPSTE24O75844 475 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 GFPT2O94808 682 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 EEF1GP26641 437 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 DNA2P51530 1060 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 NEK3P51956 506 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 CLDN2P57739 230 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 ARF5P84085 180 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 ATP11AP98196 1134 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 GNA12Q03113 381 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 ILKQ13418 452 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 CDO1Q16878 200 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 RAB6CQ53S08 254 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 GCNT7Q6ZNI0 430 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 PHLDB2Q86SQ0 1253 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 PCDH20Q8N6Y1 951 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 OR13H1Q8NG92 308 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 PPP1R16AQ96I34 528 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 LRIG1Q96JA1 1093 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 CALN1Q9BXU9 219 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 HDAC8Q9BY41 377 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 CEP44Q9C0F1 390 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 RAB6CQ9H0N0 254 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 GANQ9H2C0 597 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 CAAP1Q9H8G2 361 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 UCKL1Q9NWZ5 548 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 NOCTQ9UK39 431 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 FCF1Q9Y324 198 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 ACTL7AQ9Y615 435 aa11.78□□□□□ -0.52
HMGCS1-204ENST00000507293 KNTC1P50748 2209 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 A0A087WV48 116 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 FFAR2O15552 330 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 ADRB3P13945 408 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 DGKAP23743 735 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 ACP1P24666 158 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 ITGB7P26010 798 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 ACVRL1P37023 503 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 KLK7P49862 253 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 CCNHP51946 323 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 DAB2P98082 770 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 FMO1Q01740 532 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 CDR2Q01850 454 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 C15orf59Q2T9L4 293 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 TMEM259Q4ZIN3 620 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 SOWAHCQ53LP3 525 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 CARD16Q5EG05 197 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 ARCQ7LC44 396 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 ABI3BPQ7Z7G0 1075 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 SLC22A18ASQ8N1D0 253 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 SLC25A45Q8N413 288 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 JOSD2Q8TAC2 188 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 RXFP2Q8WXD0 754 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 CRELD1Q96HD1 420 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 HEPHQ9BQS7 1158 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 C11orf70Q9BRQ4 267 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 TM6SF2Q9BZW4 377 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 VPS16Q9H269 839 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 ZDHHC6Q9H6R6 413 aa11.77□□□□□ -0.53
HMGCS1-204ENST00000507293 KLHL11Q9NVR0 708 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms