RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF699Q32M78 642 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 NADK2Q4G0N4 442 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 MPP7Q5T2T1 576 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 CEP135Q66GS9 1140 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 KDELC2Q7Z4H8 507 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 PHACTR4Q8IZ21 702 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 CFAP52Q8N1V2 620 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 ARL10Q8N8L6 244 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 ZNF557Q8N988 423 aaPredicted RBP7.41□□□□□ -1.22
VCAN-207ENST00000507162 KYQ8NBH2 561 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 RNF139Q8WU17 664 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 EDEM1Q92611 657 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 ZNF516Q92618 1163 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 PMEPA1Q969W9 287 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 FAM131CQ96AQ9 280 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 SLC17A9Q9BYT1 436 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 SLC29A3Q9BZD2 475 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 SLC13A1Q9BZW2 595 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 CLPBQ9H078 707 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 XYLT2Q9H1B5 865 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 TLK1Q9UKI8 766 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 GPR34Q9UPC5 381 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 ENTPD4Q9Y227 616 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 B3GALT1Q9Y5Z6 326 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 USP3Q9Y6I4 520 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 ITIH6Q6UXX5 1313 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 PKDREJQ9NTG1 2253 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 SCN8AQ9UQD0 1980 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 CSMD2Q7Z408 3487 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 DCHS2Q6V1P9 2916 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 LOC101059948A0A1B0GTJ6 334 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 TYW5A2RUC4 315 aaKnown RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 KPNA3O00505 521 aaPredicted RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 FPGTO14772 594 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 MSI1O43347 362 aaKnown RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 STX6O43752 255 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 NADKO95544 446 aaPredicted RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 C4BPAP04003 597 aaKnown RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 PDGFAP04085 211 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 CELA2BP08218 269 aaPredicted RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 FGF3P11487 239 aaPredicted RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 HOXB4P17483 251 aaPredicted RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 TRIM21P19474 475 aaKnown RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 RECQLP46063 649 aaPredicted RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 LEPRP48357 1165 aaKnown RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 SLC11A2P49281 568 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 ARSDP51689 593 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 CASP5P51878 434 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 THOP1P52888 689 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 MC1RQ01726 317 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 SGCGQ13326 291 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 ANKRD1Q15327 319 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 AMZ1Q400G9 498 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 PRR30Q53SZ7 412 aaPredicted RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 PIP5KL1Q5T9C9 394 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 KYAT3Q6YP21 454 aaKnown RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 NRSN1Q8IZ57 195 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 HJURPQ8NCD3 748 aaPredicted RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 RCBTB1Q8NDN9 531 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 PCDH19Q8TAB3 1148 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 ART4Q93070 314 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 MYEOVQ96EZ4 313 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 FEM1CQ96JP0 617 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 EFHD1Q9BUP0 239 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 LRRC61Q9BV99 259 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 MFRPQ9BY79 579 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 B3GNT4Q9C0J1 378 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 PNPLA8Q9NP80 782 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 DYRK4Q9NR20 520 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 SLC39A1Q9NY26 324 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 RRN3Q9NYV6 651 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 LUZP4Q9P127 313 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 STOML2Q9UJZ1 356 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 HBS1LQ9Y450 684 aaKnown RBP7.4□□□□□ -1.22
VCAN-207ENST00000507162 KCTD3Q9Y597 815 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 KCNMB2Q9Y691 235 aa7.4□□□□□ -1.22
VCAN-207ENST00000507162 TRPM6Q9BX84 2022 aa7.4□□□□□ -1.23
VCAN-207ENST00000507162 M0QYT0 321 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 MCF2LO15068 1137 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 KIAA0391O15091 583 aaKnown RBP7.39□□□□□ -1.23
VCAN-207ENST00000507162 IRAK2O43187 625 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 ACSL4O60488 711 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 CD2BP2O95400 341 aaKnown RBP7.39□□□□□ -1.23
VCAN-207ENST00000507162 STAU1O95793 577 aaKnown RBP7.39□□□□□ -1.23
VCAN-207ENST00000507162 LATS1O95835 1130 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 CTSEP14091 401 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 IDEP14735 1019 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 PDCP20941 246 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 PPARDQ03181 441 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 ARHGEF7Q14155 803 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 NR6A1Q15406 480 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 DLG2Q15700 870 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 ARHGAP44Q17R89 818 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 MAP9Q49MG5 647 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 DCAF6Q58WW2 860 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 EFHC2Q5JST6 749 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 DIEXFQ68CQ4 756 aaKnown RBP7.39□□□□□ -1.23
VCAN-207ENST00000507162 Q6ZVU0 165 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 RD3Q7Z3Z2 195 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 PIM3Q86V86 326 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms