RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 C1orf61Q13536 156 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 ARID5BQ14865 1188 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 ISXQ2M1V0 245 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 ZNF284Q2VY69 593 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 RABGAP1LQ5R372 815 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 SEL1L3Q68CR1 1132 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 DENND1BQ6P3S1 775 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 INO80CQ6PI98 192 aaPredicted RBP5.91□□□□□ -1.46
GYPB-208ENST00000507009 GCNT7Q6ZNI0 430 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 RBM44Q6ZP01 1051 aaKnown RBP5.91□□□□□ -1.46
GYPB-208ENST00000507009 USP53Q70EK8 1073 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 RRAGAQ7L523 313 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 CACTIN-AS1Q8N1I8 211 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 GUF1Q8N442 669 aaKnown RBP5.91□□□□□ -1.46
GYPB-208ENST00000507009 ATP11CQ8NB49 1132 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 CHST14Q8NCH0 376 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 OR52K2Q8NGK3 314 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 TMEM174Q8WUU8 243 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 SLC35F5Q8WV83 523 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 ERCC4Q92889 916 aaPredicted RBP5.91□□□□□ -1.46
GYPB-208ENST00000507009 EXTL1Q92935 676 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 AZIN2Q96A70 460 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 WBP1Q96G27 269 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 BTN2A3PQ96KV6 586 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 SPATA32Q96LK8 384 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 NT5C1BQ96P26 610 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 TSG101Q99816 390 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 ZSWIM1Q9BR11 485 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 SIK2Q9H0K1 926 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 TNKS2Q9H2K2 1166 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 KDM4CQ9H3R0 1056 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 EPB41L5Q9HCM4 733 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 PREBQ9HCU5 417 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 DDIT4Q9NX09 232 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 NLGN3Q9NZ94 848 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 SLC12A6Q9UHW9 1150 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 CFAP45Q9UL16 551 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 VANGL2Q9ULK5 521 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 TPX2Q9ULW0 747 aaKnown RBP5.91□□□□□ -1.46
GYPB-208ENST00000507009 ZFR2Q9UPR6 939 aaKnown RBP5.91□□□□□ -1.46
GYPB-208ENST00000507009 ENTPD2Q9Y5L3 495 aa5.91□□□□□ -1.46
GYPB-208ENST00000507009 LY6G6EA0A0G2JKS1 128 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 POM121BA6NF01 834 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 TCAF2A6NFQ2 919 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 KCNU1A8MYU2 1149 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 E5RJQ4 531 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 H3BM21 787 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 K7ERQ8 282 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 RNF103O00237 685 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 SCAMP1O15126 338 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 SNAP91O60641 907 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 GRAP2O75791 330 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 ADCY5O95622 1261 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 TRUB2O95900 331 aaKnown RBP5.9□□□□□ -1.46
GYPB-208ENST00000507009 PAK4O96013 591 aaPredicted RBP5.9□□□□□ -1.46
GYPB-208ENST00000507009 MT-CO1P00395 513 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 CTSLP07711 333 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 RHOCP08134 193 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 PAEPP09466 180 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 FAM87AP0C7U9 286 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 RRM1P23921 792 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 TBXAS1P24557 533 aaPredicted RBP5.9□□□□□ -1.46
GYPB-208ENST00000507009 CHRNA3P32297 505 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 CSRP3P50461 194 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 IRAK1P51617 712 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 HNRNPKP61978 463 aaKnown RBP eCLIP5.9□□□□□ -1.46
GYPB-208ENST00000507009 SULT2A1Q06520 285 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 DPYDQ12882 1025 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 SRSF6Q13247 344 aaKnown RBP5.9□□□□□ -1.46
GYPB-208ENST00000507009 CLN3Q13286 438 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 NNTQ13423 1086 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 SLC12A1Q13621 1099 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 PKP1Q13835 747 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 PDE1CQ14123 709 aaPredicted RBP5.9□□□□□ -1.46
GYPB-208ENST00000507009 NR0B2Q15466 257 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 TAF5Q15542 800 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 TGIF1Q15583 401 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 CNGA2Q16280 664 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 NFIL3Q16649 462 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 ZCWPW2Q504Y3 356 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 PERM1Q5SV97 790 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 PIP5KL1Q5T9C9 394 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 CXorf57Q6NSI4 855 aaKnown RBP5.9□□□□□ -1.46
GYPB-208ENST00000507009 FBXL22Q6P050 247 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 LINGO4Q6UY18 593 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 HORMAD1Q86X24 394 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 ARHGEF19Q8IW93 802 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 PARP9Q8IXQ6 854 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 RBFAQ8N0V3 343 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 SLC22A18ASQ8N1D0 253 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 SCML4Q8N228 414 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 ARL14Q8N4G2 192 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 SH2D3CQ8N5H7 860 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 EXD3Q8N9H8 876 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 ZNF548Q8NEK5 533 aaPredicted RBP5.9□□□□□ -1.46
GYPB-208ENST00000507009 CCDC97Q96F63 343 aaPredicted RBP5.9□□□□□ -1.46
GYPB-208ENST00000507009 SLC39A13Q96H72 371 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 PRR11Q96HE9 360 aaPredicted RBP5.9□□□□□ -1.46
GYPB-208ENST00000507009 FAXDC2Q96IV6 333 aa5.9□□□□□ -1.46
GYPB-208ENST00000507009 PPP1R13BQ96KQ4 1090 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms