RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 ZNF804BA4D1E1 1349 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.38□□□□□ -1.71
CLOCK-205ENST00000506747 OR6C68A6NDL8 312 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 PGPEP1LA6NFU8 196 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 PRSS47A8MTI9 375 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 ADAP00813 363 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 PRR35P0CG20 571 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 UBL4AP11441 157 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 ATP5F1P24539 256 aaPredicted RBP4.38□□□□□ -1.71
CLOCK-205ENST00000506747 CERS1P27544 350 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 MAPK4P31152 587 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 ICAM3P32942 547 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 CASP2P42575 452 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 CCR9P51686 369 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 UFM1P61960 85 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 SSBP2P81877 361 aaPredicted RBP4.38□□□□□ -1.71
CLOCK-205ENST00000506747 LMOD3Q0VAK6 560 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 C5orf22Q49AR2 442 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 FAM69AQ5T7M9 428 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 TMTC3Q6ZXV5 915 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 C1QL2Q7Z5L3 287 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 CHD1LQ86WJ1 897 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 ZMIZ2Q8NF64 920 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 TREX2Q9BQ50 279 aaPredicted RBP4.38□□□□□ -1.71
CLOCK-205ENST00000506747 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.38□□□□□ -1.71
CLOCK-205ENST00000506747 CXorf56Q9H5V9 222 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 BRF2Q9HAW0 419 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 PDGFCQ9NRA1 345 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 OLA1Q9NTK5 396 aaKnown RBP4.38□□□□□ -1.71
CLOCK-205ENST00000506747 TBC1D22BQ9NU19 505 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 ALKBH4Q9NXW9 302 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 KCND2Q9NZV8 630 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 FBXO40Q9UH90 709 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 SARDHQ9UL12 918 aa4.38□□□□□ -1.71
CLOCK-205ENST00000506747 PABPN1LA6NDY0 278 aaKnown RBP4.37□□□□□ -1.71
CLOCK-205ENST00000506747 TMEM247A6NEH6 219 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 FOXO6A8MYZ6 492 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 TLX3O43711 291 aaPredicted RBP4.37□□□□□ -1.71
CLOCK-205ENST00000506747 SERPINC1P01008 464 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 CLEC3BP05452 202 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 CTSAP10619 480 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 KELP23276 732 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 STAT1P42224 750 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 BLKP51451 505 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 SLC12A2P55011 1212 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 CYP4A11Q02928 519 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 ERV3-1Q14264 604 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 SYTL3Q4VX76 610 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 SLC9B1Q4ZJI4 515 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 MIDNQ504T8 468 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 FAM171A1Q5VUB5 890 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 SNX30Q5VWJ9 437 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 CPXM2Q8N436 756 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 KAT2BQ92831 832 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 PERPQ96FX8 193 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 TEFMQ96QE5 360 aaKnown RBP4.37□□□□□ -1.71
CLOCK-205ENST00000506747 CHCHD6Q9BRQ6 235 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 HIPK3Q9H422 1215 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 TAS2R10Q9NYW0 307 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 AGO2Q9UKV8 859 aaKnown RBP4.37□□□□□ -1.71
CLOCK-205ENST00000506747 SUFUQ9UMX1 484 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 TNFSF13BQ9Y275 285 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 PIAS3Q9Y6X2 628 aa4.37□□□□□ -1.71
CLOCK-205ENST00000506747 KIR2DS5A0A0G2JLQ3 304 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.36□□□□□ -1.71
CLOCK-205ENST00000506747 SMIM35A0A1B0GVV1 85 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 KIR2DS3K7RE56 304 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 IFNL4K9M1U5 179 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 ATG13O75143 517 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 MLYCDO95822 493 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 LCKP06239 509 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 COX7A2P14406 83 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 EPHB2P29323 1055 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 MPGP29372 298 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 EFNB1P98172 346 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 GOLGA8FQ08AF8 430 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 ZNF626Q68DY1 528 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 ZNF425Q6IV72 752 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 FAM57BQ71RH2 274 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 PRSS45Q7RTY3 260 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 PIP4P1Q86T03 277 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 DIS3L2Q8IYB7 885 aaKnown RBP4.36□□□□□ -1.71
CLOCK-205ENST00000506747 KDM1BQ8NB78 822 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 METTL6Q8TCB7 284 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 FAR1Q8WVX9 515 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 HSPH1Q92598 858 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 SIGLEC11Q96RL6 698 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 SLC25A18Q9H1K4 315 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 TERF2IPQ9NYB0 399 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 MPP6Q9NZW5 540 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 KLHL13Q9P2N7 655 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 ORC3Q9UBD5 711 aaPredicted RBP4.36□□□□□ -1.71
CLOCK-205ENST00000506747 FBXO9Q9UK97 447 aaPredicted RBP4.36□□□□□ -1.71
CLOCK-205ENST00000506747 LAMP3Q9UQV4 416 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 PSAT1Q9Y617 370 aa4.36□□□□□ -1.71
CLOCK-205ENST00000506747 TTBK1Q5TCY1 1321 aaPredicted RBP4.35□□□□□ -1.71
CLOCK-205ENST00000506747 PI4KAP2A4QPH2 592 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 FAM157AC9JC47 383 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms