RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 PRKCIP41743 596 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 MAPKAPK2P49137 400 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 SERPINH1P50454 418 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 RPL7AP62424 266 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 OGDHQ02218 1023 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 FOXC1Q12948 553 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 NR1I3Q14994 352 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 TRIP6Q15654 476 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 KLHL40Q2TBA0 621 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 PIP5KL1Q5T9C9 394 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 DNAJC24Q6P3W2 148 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 DPY19L3Q6ZPD9 716 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 DRC7Q8IY82 874 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 PCDH20Q8N6Y1 951 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 CHST14Q8NCH0 376 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 VOPP1Q96AW1 172 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 ARRDC3Q96B67 414 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D31Q96DN5 1066 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 VCPIP1Q96JH7 1222 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 CCDC114Q96M63 670 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 MCEEQ96PE7 176 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 CNPY3Q9BT09 278 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 SCNM1Q9BWG6 230 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 CEP44Q9C0F1 390 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 PREBQ9HCU5 417 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 ATP13A1Q9HD20 1204 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 SEPT11Q9NVA2 429 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 AIPL1Q9NZN9 384 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3DA0A087WVF3 549 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3IA0A087WXS9 549 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3EA0A087X179 549 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3KA0A087X1G2 549 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 A0A1B0GTQ1 180 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 FAM221BA6H8Z2 402 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3FA6NER0 549 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3LB9A6J9 549 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 DFNA5O60443 496 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 DKK1O94907 266 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 PRNPP04156 253 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3HP0C7X1 549 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 GZMAP12544 262 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 SPINK2P20155 84 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TNFAIP3P21580 790 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 CD38P28907 300 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 L1CAMP32004 1257 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 NUDT1P36639 197 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 ACVRL1P37023 503 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 ETFBP38117 255 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 PBX1P40424 430 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 CCT8P50990 548 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 AIF1P55008 147 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 MAMLD1Q13495 774 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 POM121L1PQ3SYA9 428 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 FILIP1LQ4L180 1135 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 FIGNQ5HY92 759 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3GQ6DHY5 549 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3CQ6IPX1 549 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 NAPEPLDQ6IQ20 393 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 PLEKHA7Q6IQ23 1121 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 RETSATQ6NUM9 610 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 PPP1R2P3Q6NXS1 205 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 ZNF571Q7Z3V5 609 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 RAB44Q7Z6P3 723 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 SLFN11Q7Z7L1 901 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 PLPP6Q8IY26 295 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TBC1D3Q8IZP1 549 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 PYROXD2Q8N2H3 581 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 GATA6Q92908 595 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 ARHGEF2Q92974 986 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 ISG20Q96AZ6 181 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 SPON2Q9BUD6 331 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 HDAC8Q9BY41 377 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 EDEM3Q9BZQ6 932 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 MAGEH1Q9H213 219 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 TNKS2Q9H2K2 1166 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 NOL6Q9H6R4 1146 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 FZD10Q9ULW2 581 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 DMTF1Q9Y222 760 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 BTBD3Q9Y2F9 522 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 NEUROG3Q9Y4Z2 214 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 ACTL7AQ9Y615 435 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 WASF2Q9Y6W5 498 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 DOCK9Q9BZ29 2069 aa9.26□□□□□ -0.93
PDLIM5-209ENST00000506632 SYCE3A1L190 88 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 ANKRD62A6NC57 917 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 WASH4PA8MWX3 477 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 KPNA3O00505 521 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 DDX3XO00571 662 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 KCNK3O14649 394 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 HYAL3O43820 417 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 BNIP3LO60238 219 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 LEFTY1O75610 366 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 TRIM16O95361 564 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 FTH1P19P0C7X4 201 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 C21orf59P57076 290 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 NXPH1P58417 271 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 FOXK1P85037 733 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 SUZ12Q15022 739 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 SHBQ15464 509 aa9.25□□□□□ -0.93
PDLIM5-209ENST00000506632 ASIC2Q16515 512 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms