RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 PSEN2P49810 448 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 ATXN3P54252 364 aaPredicted RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 CSE1LP55060 971 aaKnown RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 MTTPP55157 894 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 MED21Q13503 144 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 GRAMD1BQ3KR37 738 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 MMEL1Q495T6 779 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 PAN2Q504Q3 1202 aaKnown RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 RASIP1Q5U651 963 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 C9orf131Q5VYM1 1079 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 LIPMQ5VYY2 423 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 TMEM198Q66K66 360 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 NAPEPLDQ6IQ20 393 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 USP50Q70EL3 339 aaPredicted RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 TMC7Q7Z402 723 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 ADGRG6Q86SQ4 1221 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 FSTL5Q8N475 847 aaPredicted RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 TMEM151AQ8N4L1 468 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 C3orf58Q8NDZ4 430 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 IPMKQ8NFU5 416 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 JADE3Q92613 823 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 IFT43Q96FT9 208 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 CATSPER2Q96P56 530 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 CDRT15Q96T59 188 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 PAAF1Q9BRP4 392 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 FTHL17Q9BXU8 183 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 DRC3Q9H069 523 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 VCX3BQ9H321 246 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 RAP2CQ9Y3L5 183 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 RALGAPA2Q2PPJ7 1873 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 RGSL1A5PLK6 1076 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 CASTOR2A6NHX0 329 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 H2AFYO75367 372 aaKnown RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 F9P00740 461 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 JUNP05412 331 aaKnown RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 THP07101 528 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 SLC35E2BP0CK96 405 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 VCLP18206 1134 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 BDNFP23560 247 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 PIK3R1P27986 724 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 LRPAP1P30533 357 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 LHX1P48742 406 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 CXCR3P49682 368 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 PKNOX1P55347 436 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 ADAM17P78536 824 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 MPP1Q00013 466 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 DLG1Q12959 904 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 SLC12A1Q13621 1099 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 CYLC2Q14093 348 aaPredicted RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 PDCD2Q16342 344 aaPredicted RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 EML3Q32P44 896 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 RAB41Q5JT25 222 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 ZYG11AQ6WRX3 759 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 KBTBD6Q86V97 674 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 CEP97Q8IW35 865 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 DSELQ8IZU8 1212 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 KYQ8NBH2 561 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 USP13Q92995 863 aaPredicted RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 SGF29Q96ES7 293 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 VAT1Q99536 393 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 GPR22Q99680 433 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 MCMBPQ9BTE3 642 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 C1QTNF1Q9BXJ1 281 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 BRD8Q9H0E9 1235 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 ATXN3LQ9H3M9 355 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 MIOSQ9NXC5 875 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 GNEQ9Y223 722 aaKnown RBP7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 ACOT9Q9Y305 439 aa7.74□□□□□ -1.17
PPARGC1A-204ENST00000506055 NUP205Q92621 2012 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 C17orf102A2RUQ5 167 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 GRID2O43424 1007 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 AHCYL1O43865 530 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 DDHD2O94830 711 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 APOA4P06727 396 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 UQCRBP14927 111 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 PRDX6P30041 224 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 MSLNQ13421 630 aaPredicted RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 HNRNPDQ14103 355 aaKnown RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 ESRP1Q6NXG1 681 aaKnown RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 ACAD11Q709F0 780 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 LINC00523Q86TU6 105 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 TAC4Q86UU9 113 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 SPNS2Q8IVW8 549 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 CENPLQ8N0S6 344 aaPredicted RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 ICA1LQ8NDH6 482 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 SCAMP5Q8TAC9 235 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 ZSCAN18Q8TBC5 510 aaPredicted RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 ZC3H15Q8WU90 426 aaKnown RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 NXNL1Q96CM4 212 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 PGAP3Q96FM1 320 aaPredicted RBP7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 GCNAQ96QF7 691 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 TSPAN18Q96SJ8 248 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 KIFC1Q9BW19 673 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 RHOJQ9H4E5 214 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 SLC2A6Q9UGQ3 507 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 CLEC11AQ9Y240 323 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 INPP5FQ9Y2H2 1132 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 FIS1Q9Y3D6 152 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 CAPN8A6NHC0 703 aa7.73□□□□□ -1.17
PPARGC1A-204ENST00000506055 TMEM233B4DJY2 109 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms