RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 HPCAL4Q9UM19 191 aa21.5■■□□□ 1.03
SQSTM1-210ENST00000506042 CXorf51AA0A1B0GTR3 108 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 ILVBLA1L0T0 632 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 NEMP1O14524 444 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 FPGTO14772 594 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 TLX3O43711 291 aaPredicted RBP21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 SLC9A1P19634 815 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 RABIFP47224 123 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 RPIAP49247 311 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 METAP1P53582 386 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 TMPRSS3P57727 454 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 ERVPABLB-1P60509 514 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 CCDC173Q0VFZ6 552 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 ZNF284Q2VY69 593 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 ARL13BQ3SXY8 428 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 SLC25A52Q3SY17 297 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 FAM102AQ5T9C2 384 aaPredicted RBP21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 ZCCHC8Q6NZY4 707 aaKnown RBP21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 TMC6Q7Z403 805 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 RAB7BQ96AH8 199 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 C18orf8Q96DM3 657 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 NPY6RQ99463 290 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 SPON2Q9BUD6 331 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 C1QTNF7Q9BXJ2 289 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 NBEAQ8NFP9 2946 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 KNTC1P50748 2209 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 MYLKQ15746 1914 aa21.49■■□□□ 1.03
SQSTM1-210ENST00000506042 BECN2A8MW95 431 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 TRIM38O00635 465 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 SCAMP1O15126 338 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 OPA1O60313 960 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 ERBB2P04626 1255 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 ITGB7P26010 798 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 DNA2P51530 1060 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 MAPK8IP2Q13387 824 aaPredicted RBP21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 PTK2BQ14289 1009 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 POLD3Q15054 466 aaPredicted RBP21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 ARSIQ5FYB1 569 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 KYAT3Q6YP21 454 aaKnown RBP21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 ABI3BPQ7Z7G0 1075 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 PARGQ86W56 976 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 ERICH1Q86X53 443 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 SLC25A45Q8N413 288 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 FAM181AQ8N9Y4 354 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 WDR48Q8TAF3 677 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 BBC3Q96PG8 261 aaPredicted RBP21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 HAPLN3Q96S86 360 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 HEPHQ9BQS7 1158 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 SLC17A9Q9BYT1 436 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 ZYG11BQ9C0D3 744 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 ATP13A1Q9HD20 1204 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 ACP6Q9NPH0 428 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 PIGVQ9NUD9 493 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 DNAJC12Q9UKB3 198 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 CSNK1G3Q9Y6M4 447 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 SHROOM3Q8TF72 1996 aa21.48■■□□□ 1.03
SQSTM1-210ENST00000506042 TSPAN6O43657 245 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 AP1G1O43747 822 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 BMP6P22004 513 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 RRM1P23921 792 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 PON1P27169 355 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 RBMS1P29558 406 aaKnown RBP21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 CLDN6P56747 220 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 TAS2R38P59533 333 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 CXADRP78310 365 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 RHDQ02161 417 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 MAN2A1Q16706 1144 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 TAF1BQ53T94 588 aaPredicted RBP21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 GJB7Q6PEY0 223 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 Q6ZSR6 202 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 TFAP2DQ7Z6R9 452 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 WDTC1Q8N5D0 677 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 MLKLQ8NB16 471 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 OR13H1Q8NG92 308 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 MAPK15Q8TD08 544 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 KLK6Q92876 244 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 APOLD1Q96LR9 279 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 POLR1BQ9H9Y6 1135 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 DACH1Q9UI36 760 aa21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 FASNP49327 2511 aaKnown RBP21.47■■□□□ 1.03
SQSTM1-210ENST00000506042 ERVH48-1M5A8F1 160 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 SNAP91O60641 907 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 SRGAP2O75044 1071 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 LEFTY1O75610 366 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 LSM8O95777 96 aaKnown RBP21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 ADRB3P13945 408 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 L1CAMP32004 1257 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 GGCXP38435 758 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 SERPINH1P50454 418 aaKnown RBP21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 GABREP78334 506 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 RAD51Q06609 339 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 PTPN20Q4JDL3 420 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 ZNF605Q86T29 641 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 RYBPQ8N488 228 aaPredicted RBP21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 IL12RB2Q99665 862 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 DPH1Q9BZG8 443 aa21.46■■□□□ 1.03
SQSTM1-210ENST00000506042 DRGXA6NNA5 263 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 PES1O00541 588 aaKnown RBP21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 USP12O75317 370 aa21.45■■□□□ 1.02
SQSTM1-210ENST00000506042 DXOO77932 396 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms