RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 IL22Q9GZX6 179 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 RNF38Q9H0F5 515 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 SLC25A51Q9H1U9 297 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 CCDC134Q9H6E4 229 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 IL21Q9HBE4 155 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 PLAC1Q9HBJ0 212 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 ENTPD7Q9NQZ7 604 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 VPS45Q9NRW7 570 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 HAUS2Q9NVX0 235 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 SAMD15Q9P1V8 674 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 STOML2Q9UJZ1 356 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 ZNF510Q9Y2H8 683 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 MTCH2Q9Y6C9 303 aa8.2□□□□□ -1.1
COL4A5-208ENST00000505728 DOCK6Q96HP0 2047 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 FAM237BA0A1B0GVD1 139 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 TMEM120BA0PK00 339 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 ILVBLA1L0T0 632 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 C2orf78A6NCI8 922 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 C2orf71A6NGG8 1288 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 FAM47DPA6NHR8 397 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 F5H423 210 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 TLL1O43897 1013 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 PRAMEF11O60813 436 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 KRT37O76014 449 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 KRT38O76015 456 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 USP1O94782 785 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 FGF19O95750 216 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 MT-ND3P03897 115 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 KLKB1P03952 638 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 HLA-DQB2P05538 268 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 POLBP06746 335 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 SNRPAP09012 282 aaKnown RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 BMP1P13497 986 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 CREB1P16220 341 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 HDCP19113 662 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 POU3F3P20264 500 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 COL9A1P20849 921 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 CNTFP26441 200 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 CDC25CP30307 473 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 SLC6A4P31645 630 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 CA8P35219 290 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 ADRA1AP35348 466 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 ETFBP38117 255 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 GNA12Q03113 381 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 SLC18A2Q05940 514 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 DNAJC3Q13217 504 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 ZNF177Q13360 481 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 PCID2Q5JVF3 399 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 ZNF783Q6ZMS7 281 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 MARK2Q7KZI7 788 aaKnown RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 OTOP3Q7RTS5 596 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 TFAP2DQ7Z6R9 452 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 TMEM135Q86UB9 458 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 CTAGE3PQ8IX95 158 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 BBS5Q8N3I7 341 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 PPM1NQ8N819 430 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 MRPL43Q8N983 215 aaKnown RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 DNAAF3Q8N9W5 541 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 SPPL3Q8TCT6 385 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 BCAS4Q8TDM0 211 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 DENND1AQ8TEH3 1009 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 MZB1Q8WU39 189 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 MTBPQ96DY7 904 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 MRRFQ96E11 262 aaKnown RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 OXNAD1Q96HP4 312 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 UHRF1Q96T88 793 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 LRRC3Q9BY71 257 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 SP110Q9HB58 689 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 MRM3Q9HC36 420 aaKnown RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 ZNF334Q9HCZ1 680 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 PPANQ9NQ55 473 aaKnown RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 GKN1Q9NS71 199 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 SYBUQ9NX95 663 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 AGO1Q9UL18 857 aaKnown RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 SOX13Q9UN79 622 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 ZFP37Q9Y6Q3 630 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-208ENST00000505728 FAM169AQ9Y6X4 670 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 TRIOO75962 3097 aa8.19□□□□□ -1.1
COL4A5-208ENST00000505728 OBSL1O75147 1896 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 PLXNA4Q9HCM2 1894 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 A0A1B0GVM2 712 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 A0A1W2PPM1 405 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 LCHNA4D1U4 455 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 TCAF2A6NFQ2 919 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 SOBPA7XYQ1 873 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 CXorf49A8MYA2 514 aaPredicted RBP8.18□□□□□ -1.1
COL4A5-208ENST00000505728 C5orf67F2Z3F1 127 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 H3BNC9 293 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 J3KR12 359 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 KDELR3O43731 214 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 FAM107AO95990 144 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 GLUD1P00367 558 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 C8AP07357 584 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 RHOCP08134 193 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 CES1P23141 567 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 DDX6P26196 483 aaKnown RBP eCLIP8.18□□□□□ -1.1
COL4A5-208ENST00000505728 GABRR2P28476 465 aa8.18□□□□□ -1.1
COL4A5-208ENST00000505728 CTNNB1P35222 781 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms