RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CRLF3Q8IUI8 442 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 UNC5BQ8IZJ1 945 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 BBS5Q8N3I7 341 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 IGSF21Q96ID5 467 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 MCMBPQ9BTE3 642 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 RNF208Q9H0X6 261 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 RHOJQ9H4E5 214 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 SLC40A1Q9NP59 571 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 HEATR9A2RTY3 570 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 SNNO75324 88 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 PAPSS2O95340 614 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 PRKAA2P54646 552 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 FAM91A1Q658Y4 838 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 KIAA1841Q6NSI8 718 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 KIAA0408Q6ZU52 694 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 MIB1Q86YT6 1006 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 CALML6Q8TD86 181 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 INPP5DQ92835 1189 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 MFSD3Q96ES6 412 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 HMCESQ96FZ2 354 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 RPRD1AQ96P16 312 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 ATP13A1Q9HD20 1204 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 CHRAC1Q9NRG0 131 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 SNX15Q9NRS6 342 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 NDFIP2Q9NV92 336 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 ZNF212Q9UDV6 495 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 CHKBQ9Y259 395 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 PSAT1Q9Y617 370 aa17.54■□□□□ 0.4
TRAPPC11-204ENST00000505676 ABHD14A-ACY1A0A1B0GW23 586 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 SOD2P04179 222 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 COL6A2P12110 1019 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 TACR2P21452 398 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 HARS2P49590 506 aaKnown RBP17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 OCRLQ01968 901 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 STX3Q13277 289 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 POLD3Q15054 466 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 CHI3L2Q15782 390 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 TCTN1Q2MV58 587 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 GREB1Q4ZG55 1949 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 RABGAP1LQ5R372 815 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 RAP1GAP2Q684P5 730 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 DENND5AQ6IQ26 1287 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 KDELC1Q6UW63 502 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 LMNTD2Q8IXW0 634 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 DCLK2Q8N568 766 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 PPP1R14CQ8TAE6 165 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 RDH11Q8TC12 318 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 PEX13Q92968 403 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 ERP27Q96DN0 273 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 TRMT2BQ96GJ1 504 aaKnown RBP17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 SCLYQ96I15 445 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 B3GALT6Q96L58 329 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 MYRFLQ96LU7 910 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 TSNARE1Q96NA8 513 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 RAB3IPQ96QF0 476 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 GPR22Q99680 433 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 DDX50Q9BQ39 737 aaKnown RBP17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 CRISPLD1Q9H336 500 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 ATF6P18850 670 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 PBX3P40426 434 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 BST1Q10588 318 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 SERINC3Q13530 473 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 HSP90AA5PQ58FG0 334 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 N4BP2L1Q5TBK1 243 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 FSTL4Q6MZW2 842 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 CES3Q6UWW8 571 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 GALNT7Q86SF2 657 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 SPATA22Q8NHS9 363 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 KLHL29Q96CT2 875 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 MRGPRX2Q96LB1 330 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 HERC2P3Q9BVR0 1158 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 CRISPLD2Q9H0B8 497 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 MYLK2Q9H1R3 596 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 MAGEH1Q9H213 219 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 C12orf65Q9H3J6 166 aaKnown RBP17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 CWH43Q9H720 699 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 UBP1Q9NZI7 540 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 ZFP69BQ9UJL9 534 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 SHROOM3Q8TF72 1996 aa17.53■□□□□ 0.4
TRAPPC11-204ENST00000505676 ACSL4O60488 711 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 PROCP04070 461 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 SERPINE1P05121 402 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 DLDP09622 509 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 NMBRP28336 390 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 WNT3AP56704 352 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 OLIG2Q13516 323 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 HECTD3Q5T447 861 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 ZNF461Q8TAF7 563 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 TADA1Q96BN2 335 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 TMEM237Q96Q45 408 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 APOL2Q9BQE5 337 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 WWP1Q9H0M0 922 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 ARHGEF3Q9NR81 526 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 MICAL3Q7RTP6 2002 aa17.52■□□□□ 0.4
TRAPPC11-204ENST00000505676 NT5C1B-RDH14C9J2C7 533 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 ABLIM3O94929 683 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 LATS1O95835 1130 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 MT-CYBP00156 380 aaPredicted RBP17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 EPOP01588 193 aa17.52■□□□□ 0.39
TRAPPC11-204ENST00000505676 CCL23P55773 120 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms