RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ENPP2Q13822 863 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 ATXN7L2Q5T6C5 722 aaPredicted RBP13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 C22orf39Q6P5X5 142 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 TSSK4Q6SA08 328 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 TRMT11Q7Z4G4 463 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 STK40Q8N2I9 435 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 SPEM1Q8N4L4 309 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 DTWD2Q8NBA8 298 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 KCNV2Q8TDN2 545 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 UBE2Q2Q8WVN8 375 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 ATG4AQ8WYN0 398 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 PTPRN2Q92932 1015 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 EXOC2Q96KP1 924 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 OLFM3Q96PB7 478 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 PRRX2Q99811 253 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 GABRG3Q99928 467 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 CEP41Q9BYV8 373 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 PRDM16Q9HAZ2 1276 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 PRSS16Q9NQE7 514 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 SNX12Q9UMY4 172 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 EFR3BQ9Y2G0 817 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 CTAGE9A4FU28 777 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 H7C0C1 242 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 APOC4-APOC2K7ER74 178 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 KCNK1O00180 336 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 RNF103O00237 685 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 ATG13O75143 517 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 GJB3O75712 270 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 APOC2P02655 101 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 FGGP02679 453 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 MX2P20592 715 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 CASQ1P31415 396 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 GKP32189 559 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 RGRP47804 291 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 ATP5OP48047 213 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 EIF3EP60228 445 aaKnown RBP13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 SLC20A2Q08357 652 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 SNX1Q13596 522 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 LBRQ14739 615 aaKnown RBP13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 PDK1Q15118 436 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 NOMO1Q15155 1222 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 CRY1Q16526 586 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 KCTD19Q17RG1 926 aaPredicted RBP13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 LONRF2Q1L5Z9 754 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 HNRNPA1L2Q32P51 320 aaKnown RBP13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 C9orf64Q5T6V5 341 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 NYAP1Q6ZVC0 841 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 SYT13Q7L8C5 426 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 CACUL1Q86Y37 369 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 CCDC13Q8IYE1 715 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 PGBD5Q8N414 524 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 CHST14Q8NCH0 376 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 OR6K2Q8NGY2 324 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 CCDC26Q8TAB7 109 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 C1orf54Q8WWF1 131 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 HDAC11Q96DB2 347 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 ZNF419Q96HQ0 510 aaPredicted RBP13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 PBKQ96KB5 322 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 TSGA13Q96PP4 275 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 SEPT10Q9P0V9 454 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 LHX3Q9UBR4 397 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 SUN2Q9UH99 717 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 SLC8A2Q9UPR5 921 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 USP34Q70CQ2 3546 aa13.5□□□□□ -0.25
PDLIM7-212ENST00000504380 EDDM13A0A1B0GTR0 161 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 TCRBV21S2A2A0A5A6 115 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 ZSCAN5CA6NGD5 496 aaPredicted RBP13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 NPC1O15118 1278 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 MUSKO15146 869 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 MATN3O15232 486 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 INSIG1O15503 277 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 SYNCRIPO60506 623 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 JCHAINP01591 159 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 CCNCP24863 283 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 CXCL12P48061 93 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 NR2C2P49116 596 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 CLCN6P51797 869 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 PTPN5P54829 565 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 NRLP54845 237 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 MAXP61244 160 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 RHOAP61586 193 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 PPIDQ08752 370 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 DMWDQ09019 674 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 ZBTB17Q13105 803 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 SIX1Q15475 284 aaPredicted RBP13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 HSF5Q4G112 596 aaPredicted RBP13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 TMCO4Q5TGY1 634 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 PAPD7Q5XG87 772 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 RYBPQ8N488 228 aaPredicted RBP13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 KDM1BQ8NB78 822 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 TSEN2Q8NCE0 465 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 PRSS33Q8NF86 280 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 TFB1MQ8WVM0 346 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 CAPZA3Q96KX2 299 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 FAM129BQ96TA1 746 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 CD248Q9HCU0 757 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 NT5MQ9NPB1 228 aa13.49□□□□□ -0.25
PDLIM7-212ENST00000504380 KMT2EQ8IZD2 1858 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms