RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 HLA-DQA2P01906 255 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 LCKP06239 509 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 NR4A2P43354 598 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 ME1P48163 572 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 RPS6KA3P51812 740 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 ZBTB16Q05516 673 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 EFR3AQ14156 821 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 SMTNL2Q2TAL5 461 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 GXYLT1Q4G148 440 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 CTXN3Q4LDR2 81 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 RUNDC3AQ59EK9 446 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 ANKRD18AQ8IVF6 992 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 LINS1Q8NG48 757 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 CEP70Q8NHQ1 597 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 EME1Q96AY2 570 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 ZSCAN31Q96LW9 406 aaPredicted RBP6.31□□□□□ -1.4
NIPBL-203ENST00000503274 PYM1Q9BRP8 204 aaKnown RBP6.31□□□□□ -1.4
NIPBL-203ENST00000503274 WDR83Q9BRX9 315 aaKnown RBP6.31□□□□□ -1.4
NIPBL-203ENST00000503274 RASSF1Q9NS23 344 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 TMEM248Q9NWD8 314 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 RRP7AQ9Y3A4 280 aaKnown RBP6.31□□□□□ -1.4
NIPBL-203ENST00000503274 DGKBQ9Y6T7 804 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 FAM135BQ49AJ0 1406 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 RIMS2Q9UQ26 1411 aa6.31□□□□□ -1.4
NIPBL-203ENST00000503274 A0A0G2JK05 382 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 LY6G6EA0A0G2JKS1 128 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 A0A1W2PPC1 479 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 TCRBV7S3A2A0A539 114 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 SAC3D1A6NKF1 404 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 NEURL1O76050 574 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 CYP4B1P13584 511 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 HSD3B1P14060 373 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 AVPR2P30518 371 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 PPM1FP49593 454 aaPredicted RBP6.3□□□□□ -1.4
NIPBL-203ENST00000503274 PMPCAQ10713 525 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 PIK3CD-AS1Q5SR53 167 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 C6orf10Q5SRN2 563 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 VWA5B1Q5TIE3 1220 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 B4GALNT4Q76KP1 1039 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 RNF144BQ7Z419 303 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 TMEM217Q8N7C4 229 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 C2CD4CQ8TF44 421 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 RBM17Q96I25 401 aaKnown RBP6.3□□□□□ -1.4
NIPBL-203ENST00000503274 COG8Q96MW5 612 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 NOD2Q9HC29 1040 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 Q9N2J8 555 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 SPAG4Q9NPE6 437 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 SEMA4BQ9NPR2 832 aaPredicted RBP6.3□□□□□ -1.4
NIPBL-203ENST00000503274 COG5Q9UP83 839 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 STRCP1A6NGW2 1772 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 PIK3R4Q99570 1358 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 GCC2Q8IWJ2 1684 aa6.3□□□□□ -1.4
NIPBL-203ENST00000503274 NKTRP30414 1462 aaKnown RBP6.29□□□□□ -1.4
NIPBL-203ENST00000503274 SYN3O14994 580 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 TNNT1P13805 278 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 ARSAP15289 507 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 TYK2P29597 1187 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 CCT5P48643 541 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 MED1Q15648 1581 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-203ENST00000503274 PLK5Q496M5 336 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 GALNT7Q86SF2 657 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 MMP21Q8N119 569 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 ANKRD44Q8N8A2 993 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 NRACQ8N912 160 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 ZNF548Q8NEK5 533 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-203ENST00000503274 CENPIQ92674 756 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-203ENST00000503274 MSI2Q96DH6 328 aaKnown RBP6.29□□□□□ -1.4
NIPBL-203ENST00000503274 HMCESQ96FZ2 354 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 PPP1R10Q96QC0 940 aaKnown RBP6.29□□□□□ -1.4
NIPBL-203ENST00000503274 FRMD8Q9BZ67 464 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-203ENST00000503274 FOXP1Q9H334 677 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-203ENST00000503274 ZNF304Q9HCX3 659 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.29□□□□□ -1.4
NIPBL-203ENST00000503274 PCDHA12Q9UN75 941 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 DNAJC16Q9Y2G8 782 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 TNFRSF18Q9Y5U5 241 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 NCOA3Q9Y6Q9 1424 aa6.29□□□□□ -1.4
NIPBL-203ENST00000503274 UNC13BO14795 1591 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 ZFYVE9O95405 1425 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 CYP2J2P51589 502 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 LAMB3Q13751 1172 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 INPP5JQ15735 1006 aaPredicted RBP6.28□□□□□ -1.4
NIPBL-203ENST00000503274 ALG10Q5BKT4 473 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 ALG10BQ5I7T1 473 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 CBWD5Q5RIA9 395 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 MANEAQ5SRI9 462 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 GORABQ5T7V8 394 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 TTLL5Q6EMB2 1281 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 BRSK2Q8IWQ3 736 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 MYRIPQ8NFW9 859 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 SCARB1Q8WTV0 552 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 GCC1Q96CN9 775 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 ZNF48Q96MX3 618 aaPredicted RBP6.28□□□□□ -1.4
NIPBL-203ENST00000503274 FCRL4Q96PJ5 515 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 CADM1Q9BY67 442 aaKnown RBP6.28□□□□□ -1.4
NIPBL-203ENST00000503274 ACAD9Q9H845 621 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 DECR2Q9NUI1 292 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 LUZP4Q9P127 313 aa6.28□□□□□ -1.4
NIPBL-203ENST00000503274 TMEM247A6NEH6 219 aa6.27□□□□□ -1.41
NIPBL-203ENST00000503274 ATG13O75143 517 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms