RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 WDCPQ9H6R7 721 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF212Q9UDV6 495 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 SALL4Q9UJQ4 1053 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 VANGL2Q9ULK5 521 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 DAAM1Q9Y4D1 1078 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 AK5Q9Y6K8 562 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 SPTY2D1-AS1A0A0U1RR47 76 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 A0A1W2PQU0 124 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 EME2A4GXA9 379 aaPredicted RBP6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 H3BM21 787 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 M0QYT0 321 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 TRIM38O00635 465 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 TSPAN6O43657 245 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 BRINP1O60477 761 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 ZMPSTE24O75844 475 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 LSM8O95777 96 aaKnown RBP6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 CSF2P04141 144 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 VAV1P15498 845 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF18P17022 549 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC9A1P19634 815 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 PON1P27169 355 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 L1CAMP32004 1257 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 CLCN1P35523 988 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 KRT9P35527 623 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 RABIFP47224 123 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 SUOXP51687 545 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 NEK3P51956 506 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 METAP1P53582 386 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 PCBP4P57723 403 aaKnown RBP6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 YPEL5P62699 121 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 RHDQ02161 417 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 BECN1Q14457 450 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 ACCSLQ4AC99 568 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 PTPN20Q4JDL3 420 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 CT47A1Q5JQC4 288 aaPredicted RBP6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 PRAMEF14Q5SWL7 426 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 OTUD1Q5VV17 481 aaPredicted RBP6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 DPY19L2P1Q6NXN4 242 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 FAM183BPQ6ZVS7 135 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 Q6ZVU0 165 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 PARGQ86W56 976 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF677Q86XU0 584 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC22A18ASQ8N1D0 253 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 MLKLQ8NB16 471 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 ATP11CQ8NB49 1132 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 TMEM35BQ8NCS4 154 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 HCAR2Q8TDS4 363 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 BTN2A2Q8WVV5 523 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 CASKIN2Q8WXE0 1202 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC39A7Q92504 469 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 ARHGEF26Q96DR7 871 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 CCDC97Q96F63 343 aaPredicted RBP6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 FEM1CQ96JP0 617 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 BMFQ96LC9 184 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 APOLD1Q96LR9 279 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 FCRL3Q96P31 734 aaPredicted RBP6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 C1QTNF2Q9BXJ5 285 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 OSBPL1AQ9BXW6 950 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC17A9Q9BYT1 436 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 TKTL2Q9H0I9 626 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 MUC3BQ9H195 1237 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 SIX2Q9NPC8 291 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 DYRK4Q9NR20 520 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 PIGVQ9NUD9 493 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 IL36AQ9UHA7 158 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 VPS51Q9UID3 782 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 CTNND2Q9UQB3 1225 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 PCDHGA8Q9Y5G5 932 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 WASF2Q9Y6W5 498 aa6.24□□□□□ -1.41
LSM3P4-201ENST00000502948 LRP4O75096 1905 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 COL6A6A6NMZ7 2263 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 LY6G6EA0A0G2JKS1 128 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 I6L893 689 aaPredicted RBP6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 CBX4O00257 560 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 KPNA3O00505 521 aaPredicted RBP6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 OPA1O60313 960 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 C1QL1O75973 258 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ADCY5O95622 1261 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 GSRP00390 522 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 MT-CO1P00395 513 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 CALCAP01258 141 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ERBB2P04626 1255 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 RHOCP08134 193 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ADRB3P13945 408 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 CYP11B1P15538 503 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ITPKBP27987 946 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 OR1E1P30953 314 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 MAT2AP31153 395 aaKnown RBP6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 RECQLP46063 649 aaPredicted RBP6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 MAPKAPK2P49137 400 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 SERPINH1P50454 418 aaKnown RBP6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 IRAK1P51617 712 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 GSCP56915 257 aaPredicted RBP6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 TMPRSS3P57727 454 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 DAB2P98082 770 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 SEMG2Q02383 582 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 CENPCQ03188 943 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 EIF3IQ13347 325 aaKnown RBP6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 PTK2BQ14289 1009 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms