RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ALFQ53S48 1182 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 OTUD1Q5VV17 481 aaPredicted RBP15.04■□□□□ -0
TRAF4-212ENST00000498540 TTI2Q6NXR4 508 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 LINGO4Q6UY18 593 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 ERN2Q76MJ5 926 aaKnown RBP15.04■□□□□ -0
TRAF4-212ENST00000498540 WDTC1Q8N5D0 677 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 TMIEQ8NEW7 156 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 SNRNP27Q8WVK2 155 aaKnown RBP15.04■□□□□ -0
TRAF4-212ENST00000498540 ATXN7L3BQ96GX2 97 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 DHTKD1Q96HY7 919 aaPredicted RBP15.04■□□□□ -0
TRAF4-212ENST00000498540 BMFQ96LC9 184 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 CCDC114Q96M63 670 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 DUSP23Q9BVJ7 150 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 GTPBP4Q9BZE4 634 aaKnown RBP15.04■□□□□ -0
TRAF4-212ENST00000498540 DPH1Q9BZG8 443 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 SIK2Q9H0K1 926 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 TNKS2Q9H2K2 1166 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 USP29Q9HBJ7 922 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 UBE2TQ9NPD8 197 aaPredicted RBP15.04■□□□□ -0
TRAF4-212ENST00000498540 DYRK4Q9NR20 520 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 SSUH2Q9Y2M2 353 aa15.04■□□□□ -0
TRAF4-212ENST00000498540 RP1P56715 2156 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 RAD51BO15315 384 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 PRNPP04156 253 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 RHOCP08134 193 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 GLI1P08151 1106 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 KRT10P13645 584 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 C6P13671 934 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 DUSP3P51452 185 aaPredicted RBP15.03■□□□□ -0
TRAF4-212ENST00000498540 CDH4P55283 916 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 HNRNPKP61978 463 aaKnown RBP eCLIP15.03■□□□□ -01e-6■■■■□ 24.3
TRAF4-212ENST00000498540 KRT83P78385 493 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 CCDC15Q0P6D6 951 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 STIM1Q13586 685 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 ARSIQ5FYB1 569 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 KLHL10Q6JEL2 608 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 GUSBP11Q6P575 273 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 C22orf39Q6P5X5 142 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 IGF2-ASQ6U949 168 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 KYAT3Q6YP21 454 aaKnown RBP15.03■□□□□ -0
TRAF4-212ENST00000498540 FAM183BPQ6ZVS7 135 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 PASD1Q8IV76 773 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 TRIM59Q8IWR1 403 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 C2orf49Q9BVC5 232 aaPredicted RBP15.03■□□□□ -0
TRAF4-212ENST00000498540 HDAC8Q9BY41 377 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 ANLNQ9NQW6 1124 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 ASNSD1Q9NWL6 643 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 IL36AQ9UHA7 158 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 KLF15Q9UIH9 416 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 ATP6V1DQ9Y5K8 247 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 SNX10Q9Y5X0 201 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 PIEZO2Q9H5I5 2752 aa15.03■□□□□ -0
TRAF4-212ENST00000498540 DOCK4Q8N1I0 1966 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 A0A0D9SEW6 157 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 SPTY2D1-AS1A0A0U1RR47 76 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 CPED1A4D0V7 1026 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 BECN2A8MW95 431 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 B8ZZF3 427 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 I6L893 689 aaPredicted RBP15.02■□□□□ -0
TRAF4-212ENST00000498540 CASC3O15234 703 aaKnown RBP15.02■□□□□ -0
TRAF4-212ENST00000498540 LEFTY1O75610 366 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 ENDOD1O94919 500 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 CSF2P04141 144 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 NME1P15531 152 aaKnown RBP15.02■□□□□ -0
TRAF4-212ENST00000498540 SKOR1P84550 965 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
TRAF4-212ENST00000498540 DRAP1Q14919 205 aaPredicted RBP15.02■□□□□ -0
TRAF4-212ENST00000498540 EFHC1Q5JVL4 640 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 TPRG1LQ5T0D9 272 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 KIAA1614Q5VZ46 1190 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 ZCCHC8Q6NZY4 707 aaKnown RBP15.02■□□□□ -0
TRAF4-212ENST00000498540 GJB7Q6PEY0 223 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 CRTC1Q6UUV9 634 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 OLFML1Q6UWY5 402 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 DPY19L3Q6ZPD9 716 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 EFL1Q7Z2Z2 1120 aaKnown RBP15.02■□□□□ -0
TRAF4-212ENST00000498540 ZNF683Q8IZ20 524 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 DCAF4L2Q8NA75 395 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 PRR11Q96HE9 360 aaPredicted RBP15.02■□□□□ -0
TRAF4-212ENST00000498540 PPP1R13BQ96KQ4 1090 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 SLC46A1Q96NT5 459 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 SLC17A9Q9BYT1 436 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 PIGVQ9NUD9 493 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 EVA1BQ9NVM1 165 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 MAN1B1Q9UKM7 699 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 ENTPD2Q9Y5L3 495 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 HS3ST3A1Q9Y663 406 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 WASF2Q9Y6W5 498 aa15.02■□□□□ -0
TRAF4-212ENST00000498540 HECTD1Q9ULT8 2610 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 K7ENP7 123 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 M0QYT0 321 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 ZNF821O75541 412 aaPredicted RBP15.01□□□□□ -0.01
TRAF4-212ENST00000498540 DAB1O75553 588 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 ADCY5O95622 1261 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 PAK4O96013 591 aaPredicted RBP15.01□□□□□ -0.01
TRAF4-212ENST00000498540 AFPP02771 609 aaKnown RBP15.01□□□□□ -0.01
TRAF4-212ENST00000498540 ERBB2P04626 1255 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 TFE3P19532 575 aaPredicted RBP15.01□□□□□ -0.01
TRAF4-212ENST00000498540 BMP6P22004 513 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 RBMS1P29558 406 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms