RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 CCHCR1Q8TD31 782 aa20.1■□□□□ 0.81
SCAMP3-209ENST00000497470 C1orf54Q8WWF1 131 aa20.1■□□□□ 0.81
SCAMP3-209ENST00000497470 TEKT5Q96M29 485 aa20.1■□□□□ 0.81
SCAMP3-209ENST00000497470 CIPCQ9C0C6 399 aa20.1■□□□□ 0.81
SCAMP3-209ENST00000497470 TMEM245Q9H330 911 aa20.1■□□□□ 0.81
SCAMP3-209ENST00000497470 LTB4R2Q9NPC1 389 aa20.1■□□□□ 0.81
SCAMP3-209ENST00000497470 ZNF148Q9UQR1 794 aa20.1■□□□□ 0.81
SCAMP3-209ENST00000497470 ATP8A1Q9Y2Q0 1164 aa20.1■□□□□ 0.81
SCAMP3-209ENST00000497470 COL6A3P12111 3177 aa20.1■□□□□ 0.81
SCAMP3-209ENST00000497470 SNAP91O60641 907 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 GSRP00390 522 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 CHRNB1P11230 501 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 SRCP12931 536 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 KDSRQ06136 332 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 WASHC5Q12768 1159 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 GRM3Q14832 879 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 CCDC137Q6PK04 289 aaKnown RBP20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 ZNF354CQ86Y25 554 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 ALLCQ8N6M5 410 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 EZH1Q92800 747 aaPredicted RBP20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 CLDN23Q96B33 292 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 LRIG1Q96JA1 1093 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 CCDC114Q96M63 670 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 MGME1Q9BQP7 344 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 AP1M1Q9BXS5 423 aa20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 NYNRINQ9P2P1 1898 aaKnown RBP20.09■□□□□ 0.81
SCAMP3-209ENST00000497470 ALOX15BO15296 676 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 GAS8O95995 478 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 RBL1P28749 1068 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 MMP13P45452 471 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 HNRNPA1L2Q32P51 320 aaKnown RBP20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 IER5LQ5T953 404 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 ARHGAP36Q6ZRI8 547 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 MAATS1Q7Z4T9 603 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 ADAT2Q7Z6V5 191 aaKnown RBP20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 KLHDC8BQ8IXV7 354 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 ATP11CQ8NB49 1132 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 USP33Q8TEY7 942 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 FRS2Q8WU20 508 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 ATG4AQ8WYN0 398 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 SPOCK2Q92563 424 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 SPATA13Q96N96 652 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 GABRG3Q99928 467 aa20.08■□□□□ 0.81
SCAMP3-209ENST00000497470 NCOR1O75376 2440 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CTAGE15A4D2H0 777 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 WASH3PC4AMC7 463 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 ATG13O75143 517 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 TMCC1O94876 653 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 EGFP01133 1207 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CTAGE8P0CG41 777 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 VAV1P15498 845 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CR2P20023 1033 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 GLDCP23378 1020 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 PTPN3P26045 913 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 NTSR1P30989 418 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 ACTN2P35609 894 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 SNRPD1P62314 119 aaKnown RBP20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 SLC10A7Q0GE19 358 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 ZNF234Q14588 700 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CYTH1Q15438 398 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 GLE1Q53GS7 698 aaKnown RBP20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 NAIF1Q69YI7 327 aaPredicted RBP20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 ITPRIPL1Q6GPH6 555 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 SDE2Q6IQ49 451 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CTAGE6Q86UF2 777 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CTAGE4Q8IX94 777 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CCDC105Q8IYK2 499 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 SIX5Q8N196 739 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 MMGT1Q8N4V1 131 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 ZNF513Q8N8E2 541 aaPredicted RBP20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CINPQ9BW66 212 aaPredicted RBP20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CPEB1Q9BZB8 566 aaKnown RBP20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 POLR1EQ9GZS1 481 aaKnown RBP20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 PCDH9Q9HC56 1237 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 RBM22Q9NW64 420 aaKnown RBP eCLIP20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 HCN2Q9UL51 889 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 CA14Q9ULX7 337 aa20.07■□□□□ 0.8
SCAMP3-209ENST00000497470 MIA3Q5JRA6 1907 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 EDDM13A0A1B0GTR0 161 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 FAM187AA6NFU0 413 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 KCNN4O15554 427 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 MAP3K6O95382 1288 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 MT-CO1P00395 513 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 AP1S1P61966 158 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 FZD5Q13467 585 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 ZNF235Q14590 738 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 DLG2Q15700 870 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 EOGTQ5NDL2 527 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 C22orf39Q6P5X5 142 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 CNTD1Q8N815 330 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 OR2AP1Q8NGE2 309 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 HCAR2Q8TDS4 363 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 TUBGCP5Q96RT8 1024 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 TMEM121Q9BTD3 319 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 VPS45Q9NRW7 570 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 RBM12Q9NTZ6 932 aaKnown RBP20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 SMARCAL1Q9NZC9 954 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 PAK5Q9P286 719 aa20.06■□□□□ 0.8
SCAMP3-209ENST00000497470 NEU2Q9Y3R4 380 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms