RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 KCND3Q9UK17 655 aa4.54□□□□□ -1.68
TRIM4-205ENST00000496896 RAP2CQ9Y3L5 183 aa4.54□□□□□ -1.68
TRIM4-205ENST00000496896 EFCAB5A4FU69 1503 aa4.54□□□□□ -1.68
TRIM4-205ENST00000496896 CUX1P39880 1505 aa4.54□□□□□ -1.68
TRIM4-205ENST00000496896 AQRO60306 1485 aaKnown RBP eCLIP4.54□□□□□ -1.681e-7■■■■■ 28.4
TRIM4-205ENST00000496896 PRSS44E7EML9 344 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 STMND1H3BQB6 276 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 FAM155BO75949 473 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 SOX30O94993 753 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 METTL18O95568 372 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 GLUD1P00367 558 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 MMP3P08254 477 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 ACP5P13686 325 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 ENO3P13929 434 aaPredicted RBP4.53□□□□□ -1.68
TRIM4-205ENST00000496896 TNFRSF8P28908 595 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 AVPR1AP37288 418 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 GLUD2P49448 558 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 ABATP80404 500 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 TRAF1Q13077 416 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 TMEM268Q5VZI3 342 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 NCAPH2Q6IBW4 605 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 HEPHL1Q6MZM0 1159 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 TMEM71Q6P5X7 295 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 VPS52Q8N1B4 723 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 SMRP1Q8NCR6 262 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 NEUROG1Q92886 237 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 KTI12Q96EK9 354 aaPredicted RBP4.53□□□□□ -1.68
TRIM4-205ENST00000496896 MED30Q96HR3 178 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 SEZ6LQ9BYH1 1024 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 IL36RNQ9UBH0 155 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 SEL1LQ9UBV2 794 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 SRP68Q9UHB9 627 aaKnown RBP4.53□□□□□ -1.68
TRIM4-205ENST00000496896 TAGLN3Q9UI15 199 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 PTGDR2Q9Y5Y4 395 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 ARHGAP35Q9NRY4 1499 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 CKAP5Q14008 2032 aa4.53□□□□□ -1.68
TRIM4-205ENST00000496896 E7EVH7 732 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 I6L893 689 aaPredicted RBP4.52□□□□□ -1.69
TRIM4-205ENST00000496896 FGF3P11487 239 aaPredicted RBP4.52□□□□□ -1.69
TRIM4-205ENST00000496896 TNNT1P13805 278 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 VEGFAP15692 232 aaPredicted RBP4.52□□□□□ -1.69
TRIM4-205ENST00000496896 HOXA11P31270 313 aaPredicted RBP4.52□□□□□ -1.69
TRIM4-205ENST00000496896 RFX5P48382 616 aaPredicted RBP4.52□□□□□ -1.69
TRIM4-205ENST00000496896 MVDP53602 400 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 SYTL3Q4VX76 610 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 INO80DQ53TQ3 878 aaPredicted RBP4.52□□□□□ -1.69
TRIM4-205ENST00000496896 FNBP1LQ5T0N5 605 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 ZNF324BQ6AW86 544 aaPredicted RBP4.52□□□□□ -1.69
TRIM4-205ENST00000496896 Q6ZSV7 163 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 RNF144BQ7Z419 303 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 RBM23Q86U06 439 aaKnown RBP4.52□□□□□ -1.69
TRIM4-205ENST00000496896 WDR5BQ86VZ2 330 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 TMC8Q8IU68 726 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 BRSK2Q8IWQ3 736 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 SLC35F5Q8WV83 523 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 THAP4Q8WY91 577 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 CLPBQ9H078 707 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 SEPSECSQ9HD40 501 aaKnown RBP4.52□□□□□ -1.69
TRIM4-205ENST00000496896 DAAM1Q9Y4D1 1078 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 CC2D2AQ9P2K1 1620 aa4.52□□□□□ -1.69
TRIM4-205ENST00000496896 FYCO1Q9BQS8 1478 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 A0A1B0GVT2 93 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 HMX3A6NHT5 357 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 CYSRT1A8MQ03 144 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 IPO5O00410 1097 aaKnown RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 ACAA1P09110 424 aaPredicted RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 PLA2G2AP14555 144 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 ARSAP15289 507 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 AVPR2P30518 371 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 GJC1P36383 396 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 CHAF1AQ13111 956 aaPredicted RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 SHBQ15464 509 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 FSCBQ5H9T9 825 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 TBC1D9BQ66K14 1250 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 CAPRIN2Q6IMN6 1127 aaKnown RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 FAM83HQ6ZRV2 1179 aaPredicted RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 NOL8Q76FK4 1167 aaKnown RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 RRAGAQ7L523 313 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 ZNF367Q7RTV3 350 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 SERPINA11Q86U17 422 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 HORMAD2Q8N7B1 307 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 RBMXL3Q8N7X1 1067 aaKnown RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 ENAHQ8N8S7 591 aaPredicted RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 SCAIQ8N9R8 606 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 TEX45Q8NA69 505 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 NUDCD2Q8WVJ2 157 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 TRAPPC12Q8WVT3 735 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 POLDIP3Q9BY77 421 aaKnown RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 TAF1DQ9H5J8 278 aaPredicted RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 PLEKHA2Q9HB19 425 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 THAP1Q9NVV9 213 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 GRHL1Q9NZI5 618 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 GRHPRQ9UBQ7 328 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 UPB1Q9UBR1 384 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 SETD5Q9C0A6 1442 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 THOC2Q8NI27 1593 aaKnown RBP4.51□□□□□ -1.69
TRIM4-205ENST00000496896 CUL7Q14999 1698 aa4.51□□□□□ -1.69
TRIM4-205ENST00000496896 LRRC9Q6ZRR7 1453 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 C17orf100A8MU93 164 aa4.5□□□□□ -1.69
TRIM4-205ENST00000496896 HSPB6O14558 160 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms