RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 TAF10Q12962 218 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 SIX1Q15475 284 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-207ENST00000496756 IL27RAQ6UWB1 636 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 BBS12Q6ZW61 710 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 CPNE8Q86YQ8 564 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 JAMLQ86YT9 394 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 NAT16Q8N8M0 369 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 CCDC89Q8N998 374 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 PDZD8Q8NEN9 1154 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-207ENST00000496756 LRRC45Q96CN5 670 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 C8orf48Q96LL4 319 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 SLC2A13Q96QE2 648 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 DCLK3Q9C098 648 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 RCOR3Q9P2K3 495 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-207ENST00000496756 DRG1Q9Y295 367 aaKnown RBP13.6□□□□□ -0.23
PHGDH-207ENST00000496756 SH3BP1Q9Y3L3 701 aa13.6□□□□□ -0.23
PHGDH-207ENST00000496756 MAP2K7O14733 419 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 CAPN9O14815 690 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 TTI1O43156 1089 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 ENDOD1O94919 500 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 CER1O95813 267 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 ZBED1O96006 694 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 WASP42768 502 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 TNNT3P45378 269 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-207ENST00000496756 DAOAP59103 153 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 HLTFQ14527 1009 aaKnown RBP eCLIP13.59□□□□□ -0.23
PHGDH-207ENST00000496756 KRT81Q14533 505 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 PPP1R7Q15435 360 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 ANO4Q32M45 955 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 DUPD1Q68J44 220 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 MFSD7Q6UXD7 560 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 ADAT2Q7Z6V5 191 aaKnown RBP13.59□□□□□ -0.23
PHGDH-207ENST00000496756 ARHGAP18Q8N392 663 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 MREGQ8N565 214 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 IFT81Q8WYA0 676 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 DNASE2BQ8WZ79 361 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 OVCA2Q8WZ82 227 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 FAM149B1Q96BN6 582 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 SMOQ99835 787 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 ZNF670Q9BS34 389 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 FUT8Q9BYC5 575 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 ZWILCHQ9H900 591 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 SPHK2Q9NRA0 654 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 COMMD8Q9NX08 183 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 OGFRQ9NZT2 677 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 MTRF1LQ9UGC7 380 aaKnown RBP13.59□□□□□ -0.23
PHGDH-207ENST00000496756 MYH10P35580 1976 aa13.59□□□□□ -0.23
PHGDH-207ENST00000496756 GOLGA4Q13439 2230 aaKnown RBP13.59□□□□□ -0.23
PHGDH-207ENST00000496756 MEI4A8MW99 385 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 CLDN5O00501 218 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 DKK1O94907 266 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 CD6P30203 668 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 PTGIRP43119 386 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 CYP4F3Q08477 520 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 CALCOCO2Q13137 446 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 ERMARDQ5T6L9 678 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 PM20D1Q6GTS8 502 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 GRAMD4Q6IC98 578 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 AADACL2Q6P093 401 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 SND1Q7KZF4 910 aaKnown RBP eCLIP13.58□□□□□ -0.247e-8■■■□□ 15.4
PHGDH-207ENST00000496756 BZW1Q7L1Q6 419 aaKnown RBP13.58□□□□□ -0.24
PHGDH-207ENST00000496756 MIB1Q86YT6 1006 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 ARFGAP1Q8N6T3 406 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 GOLGA6L1Q8N7Z2 621 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 CADM4Q8NFZ8 388 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 FAM71BQ8TC56 605 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-207ENST00000496756 CASKIN2Q8WXE0 1202 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 NT5C3BQ969T7 300 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 PGAP3Q96FM1 320 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-207ENST00000496756 MRGPRX1Q96LB2 322 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 CFAP57Q96MR6 1250 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 GABRG3Q99928 467 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 FBXO44Q9H4M3 255 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 GAREM1Q9H706 876 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 CD248Q9HCU0 757 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 TM7SF3Q9NS93 570 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 ZNF446Q9NWS9 450 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 PCSK1NQ9UHG2 260 aa13.58□□□□□ -0.24
PHGDH-207ENST00000496756 TRABD2BA6NFA1 517 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 C3orf70A6NLC5 250 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-207ENST00000496756 APOC4-APOC2K7ER74 178 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 GFRA2O00451 464 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 PIK3R2O00459 728 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 FLRT2O43155 660 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 COCHO43405 550 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 LIASO43766 372 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 RRP9O43818 475 aaKnown RBP13.57□□□□□ -0.24
PHGDH-207ENST00000496756 GRAP2O75791 330 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 GABBR2O75899 941 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 RTN3O95197 1032 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-207ENST00000496756 APOC2P02655 101 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 LTFP02788 710 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 ITGAVP06756 1048 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 ITIH2P19823 946 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 TGM2P21980 687 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 MAOBP27338 520 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 YWHAQP27348 245 aa13.57□□□□□ -0.24
PHGDH-207ENST00000496756 IL1R2P27930 398 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms