RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 EID2Q8N6I1 236 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 MFSD2AQ8NA29 543 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 TMIEQ8NEW7 156 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 SLC30A5Q8TAD4 765 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 RXFP2Q8WXD0 754 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 KLK6Q92876 244 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 PCMTD1Q96MG8 357 aaPredicted RBP13.24□□□□□ -0.29
FN1-226ENST00000496542 ZYG11BQ9C0D3 744 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 RAB6CQ9H0N0 254 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 ATP13A1Q9HD20 1204 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 FANCLQ9NW38 375 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 ZNF212Q9UDV6 495 aa13.24□□□□□ -0.29
FN1-226ENST00000496542 NBEAQ8NFP9 2946 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 A0A1W2PQU0 124 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 PRAMEF26H0Y7S4 382 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 RNF103O00237 685 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 SLC31A1O15431 190 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 CYP1A1P04798 512 aaPredicted RBP13.23□□□□□ -0.29
FN1-226ENST00000496542 MMP8P22894 467 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 SDC4P31431 198 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 SERPINH1P50454 418 aaKnown RBP13.23□□□□□ -0.29
FN1-226ENST00000496542 DNA2P51530 1060 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 JAM2P57087 298 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 GNA12Q03113 381 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 CCDC15Q0P6D6 951 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 BNIP3Q12983 259 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 DNAJC3Q13217 504 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 ARSIQ5FYB1 569 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 RETSATQ6NUM9 610 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 ZNF783Q6ZMS7 281 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 DPY19L3Q6ZPD9 716 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 CLEC17AQ6ZS10 378 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 ARCQ7LC44 396 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 IQCHQ86VS3 1027 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 JOSD2Q8TAC2 188 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 GPT2Q8TD30 523 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 ERVMER34-1Q9H9K5 563 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 FZD3Q9NPG1 666 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 IL36AQ9UHA7 158 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 CHD5Q8TDI0 1954 aa13.23□□□□□ -0.29
FN1-226ENST00000496542 MAGEC1O60732 1142 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 SDC3O75056 442 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 LEFTY1O75610 366 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 ZMPSTE24O75844 475 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 PCDH8O95206 1070 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 STAT1P42224 750 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 NSFP46459 744 aaKnown RBP13.22□□□□□ -0.29
FN1-226ENST00000496542 RXRGP48443 463 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 COPB1P53618 953 aaKnown RBP13.22□□□□□ -0.29
FN1-226ENST00000496542 OVGP1Q12889 678 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 SYCP1Q15431 976 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 SMAD1Q15797 465 aaKnown RBP13.22□□□□□ -0.29
FN1-226ENST00000496542 ARL13BQ3SXY8 428 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 CCDC14Q49A88 953 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 RWDD4Q6NW29 188 aaKnown RBP13.22□□□□□ -0.29
FN1-226ENST00000496542 TRIM72Q6ZMU5 477 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 ERN2Q76MJ5 926 aaKnown RBP13.22□□□□□ -0.29
FN1-226ENST00000496542 HORMAD1Q86X24 394 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 ANKRD20A12PQ8NF67 263 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 NEK11Q8NG66 645 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 KLHDC7BQ96G42 594 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 PPP1R16AQ96I34 528 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 PPARGC1AQ9UBK2 798 aaKnown RBP13.22□□□□□ -0.29
FN1-226ENST00000496542 OR12D3Q9UGF7 316 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 LHX6Q9UPM6 363 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 SIK3Q9Y2K2 1263 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 FCF1Q9Y324 198 aaKnown RBP13.22□□□□□ -0.29
FN1-226ENST00000496542 ACTL7AQ9Y615 435 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 WASF2Q9Y6W5 498 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 ASXL3Q9C0F0 2248 aa13.22□□□□□ -0.29
FN1-226ENST00000496542 FASNP49327 2511 aaKnown RBP13.22□□□□□ -0.29
FN1-226ENST00000496542 C2CD4BA6NLJ0 364 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 LGALS16A8MUM7 142 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 ZNF821O75541 412 aaPredicted RBP13.21□□□□□ -0.29
FN1-226ENST00000496542 RFPL3O75679 317 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 THEGLP0DJG4 465 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 AKT2P31751 481 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 ADRA1BP35368 520 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 ACVRL1P37023 503 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 CLDN6P56747 220 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 ARF5P84085 180 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 STX1AQ16623 288 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 ZNF284Q2VY69 593 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 MANEALQ5VSG8 457 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 SFMBT2Q5VUG0 894 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 SEL1L3Q68CR1 1132 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 NEK5Q6P3R8 708 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 SASS6Q6UVJ0 657 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 RBM43Q6ZSC3 357 aaKnown RBP13.21□□□□□ -0.29
FN1-226ENST00000496542 PCDH20Q8N6Y1 951 aaKnown RBP13.21□□□□□ -0.29
FN1-226ENST00000496542 TMEM145Q8NBT3 493 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 GBP4Q96PP9 640 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 PCDHB18PQ96TA0 734 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 HDAC8Q9BY41 377 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 TM6SF2Q9BZW4 377 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 CEP44Q9C0F1 390 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 ZDHHC6Q9H6R6 413 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 NDFIP2Q9NV92 336 aa13.21□□□□□ -0.29
FN1-226ENST00000496542 SEPT11Q9NVA2 429 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms