RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 TTLL2Q9BWV7 592 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.91□□□□□ -1.62
XPA-204ENST00000496104 CCDC68Q9H2F9 335 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 TMEM60Q9H2L4 133 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 C7orf69Q9H7B7 122 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 EMC7Q9NPA0 242 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 ANKEF1Q9NU02 776 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 TDP1Q9NUW8 608 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 DUS2Q9NX74 493 aaKnown RBP4.91□□□□□ -1.62
XPA-204ENST00000496104 SEL1LQ9UBV2 794 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 SH3BP1Q9Y3L3 701 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 PCDHA10Q9Y5I2 948 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 RAD54BQ9Y620 910 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 U3KQA8 63 aa4.91□□□□□ -1.62
XPA-204ENST00000496104 PRRC2CQ9Y520 2896 aaKnown RBP4.9□□□□□ -1.62
XPA-204ENST00000496104 ANK3Q12955 4377 aaKnown RBP4.9□□□□□ -1.62
XPA-204ENST00000496104 MEGF8Q7Z7M0 2845 aa4.9□□□□□ -1.62
XPA-204ENST00000496104 PKD1L1Q8TDX9 2849 aa4.9□□□□□ -1.62
XPA-204ENST00000496104 FLNAP21333 2647 aaKnown RBP4.9□□□□□ -1.62
XPA-204ENST00000496104 A0A0D9SFI3 127 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 ARHGAP10A1A4S6 786 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 HMX2A2RU54 273 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 B4E171 279 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 C10orf142B7Z368 130 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 TRIM38O00635 465 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 DKC1O60832 514 aaKnown RBP eCLIP4.9□□□□□ -1.63
XPA-204ENST00000496104 ZNF217O75362 1048 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 TIPRLO75663 272 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 LARGE1O95461 756 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 DDAH2O95865 285 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 IGLV3-19P01714 112 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 GIMD1P0DJR0 217 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 HOXB2P14652 356 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 JUNBP17275 347 aaPredicted RBP4.9□□□□□ -1.63
XPA-204ENST00000496104 NR1D1P20393 614 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 EPHA8P29322 1005 aaPredicted RBP4.9□□□□□ -1.63
XPA-204ENST00000496104 ASIC1P78348 528 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 AMPD2Q01433 879 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 KDSRQ06136 332 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 LAMTOR4Q0VGL1 99 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 PLD1Q13393 1074 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 CTXN3Q4LDR2 81 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 C3orf38Q5JPI3 329 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 CFAP58Q5T655 872 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 DENND5AQ6IQ26 1287 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 NOTUMQ6P988 496 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 MFSD6Q6ZSS7 791 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 NEK10Q6ZWH5 1172 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 CYB5R4Q7L1T6 521 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 NIPA1Q7RTP0 329 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 TRIM59Q8IWR1 403 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 PHACTR4Q8IZ21 702 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 CCAR2Q8N163 923 aaKnown RBP4.9□□□□□ -1.63
XPA-204ENST00000496104 MSANTD4Q8NCY6 345 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 CADM4Q8NFZ8 388 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 UBASH3BQ8TF42 649 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 LRRC15Q8TF66 581 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 KCTD13Q8WZ19 329 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 ESR2Q92731 530 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 ATP2A3Q93084 1043 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 TMEM143Q96AN5 459 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 TRIM44Q96DX7 344 aaPredicted RBP4.9□□□□□ -1.63
XPA-204ENST00000496104 CCDC140Q96MF4 163 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 SPAG5Q96R06 1193 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 TBCBQ99426 244 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 MAP3K14Q99558 947 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 DPH2Q9BQC3 489 aaPredicted RBP4.9□□□□□ -1.63
XPA-204ENST00000496104 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 ANO3Q9BYT9 981 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 TRIM9Q9C026 710 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 XPO4Q9C0E2 1151 aaKnown RBP4.9□□□□□ -1.63
XPA-204ENST00000496104 MKRN2Q9H000 416 aaKnown RBP4.9□□□□□ -1.63
XPA-204ENST00000496104 ADNPQ9H2P0 1102 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 PSTPIP2Q9H939 334 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 KIF9Q9HAQ2 790 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 WASH6PQ9NQA3 447 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 XPNPEP1Q9NQW7 623 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 ZNF71Q9NQZ8 489 aaPredicted RBP4.9□□□□□ -1.63
XPA-204ENST00000496104 ECHDC1Q9NTX5 307 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 C14orf119Q9NWQ9 140 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 SAMD15Q9P1V8 674 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 WRAP73Q9P2S5 460 aaPredicted RBP4.9□□□□□ -1.63
XPA-204ENST00000496104 MAFFQ9ULX9 164 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 CKAP5Q14008 2032 aa4.9□□□□□ -1.63
XPA-204ENST00000496104 PKDREJQ9NTG1 2253 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 A0A1B0GUA9 196 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 TRIM64A6NGJ6 449 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 TRIM64BA6NI03 449 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 WNT9AO14904 365 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 SYN3O14994 580 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 HNRNPRO43390 633 aaKnown RBP4.89□□□□□ -1.63
XPA-204ENST00000496104 SYNCRIPO60506 623 aaKnown RBP4.89□□□□□ -1.63
XPA-204ENST00000496104 DTNBO60941 627 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 CLEC3AO75596 197 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 TIAF1O95411 115 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 SCG5P05408 212 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 THP07101 528 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 DHRS4L1P0CG22 281 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 SRGAP2CP0DJJ0 459 aa4.89□□□□□ -1.63
XPA-204ENST00000496104 CKMT2P17540 419 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms